OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Viv: multiscale visualization of high-resolution multiplexed bioimaging data on the web
Trevor Manz, Ilan Gold, Nathan Heath Patterson, et al.
Nature Methods (2022) Vol. 19, Iss. 5, pp. 515-516
Open Access | Times Cited: 50

Showing 1-25 of 50 citing articles:

The emerging landscape of spatial profiling technologies
Jeffrey R. Moffitt, Emma Lundberg, Holger Heyn
Nature Reviews Genetics (2022) Vol. 23, Iss. 12, pp. 741-759
Closed Access | Times Cited: 275

Spatial profiling technologies illuminate the tumor microenvironment
Ofer Elhanani, Raz Ben-Uri, Leeat Keren
Cancer Cell (2023) Vol. 41, Iss. 3, pp. 404-420
Open Access | Times Cited: 194

OME-NGFF: a next-generation file format for expanding bioimaging data-access strategies
Josh Moore, Chris Allan, Sébastien Besson, et al.
Nature Methods (2021) Vol. 18, Iss. 12, pp. 1496-1498
Open Access | Times Cited: 129

Advances and prospects for the Human BioMolecular Atlas Program (HuBMAP)
Sanjay Jain, Liming Pei, Jeffrey M. Spraggins, et al.
Nature Cell Biology (2023) Vol. 25, Iss. 8, pp. 1089-1100
Open Access | Times Cited: 89

OME-Zarr: a cloud-optimized bioimaging file format with international community support
Josh Moore, Daniela Basurto-Lozada, Sébastien Besson, et al.
Histochemistry and Cell Biology (2023) Vol. 160, Iss. 3, pp. 223-251
Open Access | Times Cited: 63

Anatomical structures, cell types and biomarkers of the Human Reference Atlas
Katy Börner, Sarah A. Teichmann, Ellen M. Quardokus, et al.
Nature Cell Biology (2021) Vol. 23, Iss. 11, pp. 1117-1128
Open Access | Times Cited: 96

Prospective on Imaging Mass Spectrometry in Clinical Diagnostics
Jessica L. Moore, Nathan Heath Patterson, Jeremy L. Norris, et al.
Molecular & Cellular Proteomics (2023) Vol. 22, Iss. 9, pp. 100576-100576
Open Access | Times Cited: 24

Vitessce: integrative visualization of multimodal and spatially resolved single-cell data
Mark S. Keller, Ilan Gold, Chuck McCallum, et al.
Nature Methods (2024)
Open Access | Times Cited: 13

Society for Immunotherapy of Cancer: updates and best practices for multiplex immunohistochemistry (IHC) and immunofluorescence (IF) image analysis and data sharing
Janis M. Taube, Joel Sunshine, Michael Angelo, et al.
Journal for ImmunoTherapy of Cancer (2025) Vol. 13, Iss. 1, pp. e008875-e008875
Open Access | Times Cited: 1

Challenges and opportunities for digital twins in precision medicine from a complex systems perspective
Manlio De Domenico, Luca Allegri, Guido Caldarelli, et al.
npj Digital Medicine (2025) Vol. 8, Iss. 1
Open Access | Times Cited: 1

MoBIE: a Fiji plugin for sharing and exploration of multi-modal cloud-hosted big image data
Constantin Pape, Kimberly Meechan, Ekaterina Moreva, et al.
Nature Methods (2023) Vol. 20, Iss. 4, pp. 475-476
Open Access | Times Cited: 20

Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage
Katy Börner, Philip D. Blood, Jonathan C. Silverstein, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 6

Vitessce: integrative visualization of multimodal and spatially-resolved single-cell data
Mark S. Keller, Ilan Gold, Chuck McCallum, et al.
(2021)
Open Access | Times Cited: 35

Single cell spatial analysis reveals inflammatory foci of immature neutrophil and CD8 T cells in COVID-19 lungs
Praveen Weeratunga, Laura Denney, Joshua A. Bull, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 14

Cecelia: a multifunctional image analysis toolbox for decoding spatial cellular interactions and behaviour
Dominik Schienstock, Jyh Liang Hor, Sapna Devi, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access

OME-Zarr: a cloud-optimized bioimaging file format with international community support
Josh Moore, Daniela Basurto-Lozada, Sébastien Besson, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 11

myAURA: a personalized health library for epilepsy management via knowledge graph sparsification and visualization
Rion Brattig Correia, Jordan C. Rozum, Leonard E. Cross, et al.
Journal of the American Medical Informatics Association (2025)
Open Access

Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage
Katy Börner, Philip D. Blood, Jonathan C. Silverstein, et al.
Nature Methods (2025)
Open Access

HistoMSC: Density and topology analysis for AI-based visual annotation of histopathology whole slide images
Zamani Nazri Ahmad, Khaled Al-Thelaya, Mahmood Alzubaidi, et al.
Computers in Biology and Medicine (2025) Vol. 190, pp. 109991-109991
Open Access

Physiologically Based Pharmacokinetic Modeling of Nanoparticle Biodistribution: A Review of Existing Models, Simulation Software, and Data Analysis Tools
Elena Kutumova, Ilya R. Akberdin, Ilya Kiselev, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 20, pp. 12560-12560
Open Access | Times Cited: 17

Lysolipids are prominent in subretinal drusenoid deposits, a high-risk phenotype in age-related macular degeneration
David M. Anderson, Ankita Kotnala, Lukasz G. Migas, et al.
Frontiers in Ophthalmology (2023) Vol. 3
Open Access | Times Cited: 10

Scope2Screen: Focus+Context Techniques for Pathology Tumor Assessment in Multivariate Image Data
J. M. Jessup, Robert Krueger, Simon Warchol, et al.
IEEE Transactions on Visualization and Computer Graphics (2021) Vol. 28, Iss. 1, pp. 259-269
Open Access | Times Cited: 18

Any notebook served: authoring and sharing reusable interactive widgets
Trevor Manz, Nils Gehlenborg, Nezar Abdennur
(2024)
Open Access | Times Cited: 2

Visinity: Visual Spatial Neighborhood Analysis for Multiplexed Tissue Imaging Data
Simon Warchol, Robert Krueger, Ajit J. Nirmal, et al.
IEEE Transactions on Visualization and Computer Graphics (2022), pp. 1-11
Open Access | Times Cited: 12

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