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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO
Britta Velten, Jana M. Braunger, Ricard Argelaguet, et al.
Nature Methods (2022) Vol. 19, Iss. 2, pp. 179-186
Open Access | Times Cited: 110

Showing 1-25 of 110 citing articles:

Methods and applications for single-cell and spatial multi-omics
Katy Vandereyken, Alejandro Sifrim, Bernard Thienpont, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 494-515
Open Access | Times Cited: 606
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 506
Spatial multiomics map of trophoblast development in early pregnancy
Anna Arutyunyan, Kenny Roberts, Kevin Troulé, et al.
Nature (2023) Vol. 616, Iss. 7955, pp. 143-151
Open Access | Times Cited: 139
Spatial biology of cancer evolution
Zaira Seferbekova, Artem Lomakin, Lucy Yates, et al.
Nature Reviews Genetics (2022) Vol. 24, Iss. 5, pp. 295-313
Closed Access | Times Cited: 118
MUON: multimodal omics analysis framework
Danila Bredikhin, Ilia Kats, Oliver Stegle
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 105
Unsupervised machine learning methods and emerging applications in healthcare
C. Eckhardt, Sophia Madjarova, Riley J. Williams, et al.
Knee Surgery Sports Traumatology Arthroscopy (2022) Vol. 31, Iss. 2, pp. 376-381
Closed Access | Times Cited: 92
Integrated single-nucleus and spatial transcriptomics captures transitional states in soybean nodule maturation
Zhijian Liu, Xiangying Kong, Yanping Long, et al.
Nature Plants (2023) Vol. 9, Iss. 4, pp. 515-524
Open Access | Times Cited: 81
Probabilistic embedding, clustering, and alignment for integrating spatial transcriptomics data with PRECAST
Wei Liu, Xu Liao, Ziye Luo, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 71
LIANA+ provides an all-in-one framework for cell–cell communication inference
Daniel Dimitrov, Philipp Schäfer, Elias Farr, et al.
Nature Cell Biology (2024) Vol. 26, Iss. 9, pp. 1613-1622
Open Access | Times Cited: 24
Spatial multi-omics: novel tools to study the complexity of cardiovascular diseases
Paul Kießling, Christoph Kuppe
Genome Medicine (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 23
Nonnegative spatial factorization applied to spatial genomics
F. William Townes, Barbara E. Engelhardt
Nature Methods (2022) Vol. 20, Iss. 2, pp. 229-238
Open Access | Times Cited: 62
Alignment of spatial genomics data using deep Gaussian processes
Andrew Jones, F. William Townes, Didong Li, et al.
Nature Methods (2023) Vol. 20, Iss. 9, pp. 1379-1387
Open Access | Times Cited: 40
Principles and challenges of modeling temporal and spatial omics data
Britta Velten, Oliver Stegle
Nature Methods (2023) Vol. 20, Iss. 10, pp. 1462-1474
Closed Access | Times Cited: 40
Multicellular factor analysis of single-cell data for a tissue-centric understanding of disease
Ricardo O. Ramirez Flores, Jan D. Lanzer, Daniel Dimitrov, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 27
Spatial transcriptomics in development and disease
Ran Zhou, Gaoxia Yang, Yan Zhang, et al.
Molecular Biomedicine (2023) Vol. 4, Iss. 1
Open Access | Times Cited: 26
Decoding Aging Hallmarks at the Single-Cell Level
Shuai Ma, Chi Xu, Yusheng Cai, et al.
Annual Review of Biomedical Data Science (2023) Vol. 6, Iss. 1, pp. 129-152
Open Access | Times Cited: 25
Voyager: exploratory single-cell genomics data analysis with geospatial statistics
Lambda Moses, Pétur Helgi Einarsson, Kayla Jackson, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 25
LIANA+: an all-in-one cell-cell communication framework
Daniel Dimitrov, Philipp Schäfer, Elias Farr, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 24
Bacteria and bacteriophage consortia are associated with protective intestinal metabolites in patients receiving stem cell transplantation
Erik Thiele Orberg, Elisabeth Meedt, Andreas Hiergeist, et al.
Nature Cancer (2024) Vol. 5, Iss. 1, pp. 187-208
Open Access | Times Cited: 14
Life at the borderlands: microbiomes of interfaces critical to One Health
Simon R. Law, Falko Mathes, Amy M. Paten, et al.
FEMS Microbiology Reviews (2024) Vol. 48, Iss. 2
Open Access | Times Cited: 9
Understanding machine learning applications in dementia research and clinical practice: a review for biomedical scientists and clinicians
Yihan Wang, Shu Liu, Alanna G. Spiteri, et al.
Alzheimer s Research & Therapy (2024) Vol. 16, Iss. 1
Open Access | Times Cited: 8
Spatial transcriptomics using multiplexed deterministic barcoding in tissue
Johannes Wirth, Nina Huber, Kelvin Yin, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 18
Applications of Omics Technology for Livestock Selection and Improvement
Dibyendu Chakraborty, Neelesh Sharma, Savleen Kour, et al.
Frontiers in Genetics (2022) Vol. 13
Open Access | Times Cited: 25
Multi-omics identify falling LRRC15 as a COVID-19 severity marker and persistent pro-thrombotic signals in convalescence
Jack Gisby, Norzawani B Buang, Artemis Papadaki, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 25
FISHFactor: a probabilistic factor model for spatial transcriptomics data with subcellular resolution
Florin C. Walter, Oliver Stegle, Britta Velten
Bioinformatics (2023) Vol. 39, Iss. 5
Open Access | Times Cited: 15
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