OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Cross-modal coherent registration of whole mouse brains
Lei Qu, Yuanyuan Li, Peng Xie, et al.
Nature Methods (2021) Vol. 19, Iss. 1, pp. 111-118
Open Access | Times Cited: 65

Showing 1-25 of 65 citing articles:

Merged magnetic resonance and light sheet microscopy of the whole mouse brain
G. Allan Johnson, Yuqi Tian, David G. Ashbrook, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 17
Open Access | Times Cited: 36

Waxholm Space atlas of the rat brain: a 3D atlas supporting data analysis and integration
Heidi Kleven, Ingvild E. Bjerke, Francisco Clascá, et al.
Nature Methods (2023) Vol. 20, Iss. 11, pp. 1822-1829
Open Access | Times Cited: 33

A guide to the BRAIN Initiative Cell Census Network data ecosystem
Michael Hawrylycz, Maryann E. Martone, Giorgio A. Ascoli, et al.
PLoS Biology (2023) Vol. 21, Iss. 6, pp. e3002133-e3002133
Open Access | Times Cited: 31

Virtual reality-empowered deep-learning analysis of brain cells
Doris Kaltenecker, Rami Al-Maskari, Moritz Negwer, et al.
Nature Methods (2024) Vol. 21, Iss. 7, pp. 1306-1315
Open Access | Times Cited: 14

Developmental mouse brain common coordinate framework
Fae N. Kronman, Josephine K. Liwang, Rebecca Betty, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 9

D-LMBmap: a fully automated deep-learning pipeline for whole-brain profiling of neural circuitry
Zhongyu Li, Zengyi Shang, Jingyi Liu, et al.
Nature Methods (2023) Vol. 20, Iss. 10, pp. 1593-1604
Open Access | Times Cited: 18

Developmental Mouse Brain Common Coordinate Framework
Fae A. Kronman, Josephine K. Liwang, Rebecca Betty, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 15

Multimodal 3D Mouse Brain Atlas Framework with the Skull-Derived Coordinate System
Johanna Perens, Casper Gravesen Salinas, Urmas Roostalu, et al.
Neuroinformatics (2023) Vol. 21, Iss. 2, pp. 269-286
Open Access | Times Cited: 14

Uncovering CNS access of lipidated exendin-4 analogues by quantitative whole-brain 3D light sheet imaging
Grethe Skovbjerg, Urmas Roostalu, Casper G. Salinas, et al.
Neuropharmacology (2023) Vol. 238, pp. 109637-109637
Closed Access | Times Cited: 13

Neighbouring-slice Guided Multi-View Framework for brain image segmentation
Xuemeng Hu, Zhongyu Li, Yi Wu, et al.
Neurocomputing (2024) Vol. 575, pp. 127315-127315
Closed Access | Times Cited: 5

Whole-brain Optical Imaging: A Powerful Tool for Precise Brain Mapping at the Mesoscopic Level
Tao Jiang, Hui Gong, Jing Yuan
Neuroscience Bulletin (2023) Vol. 39, Iss. 12, pp. 1840-1858
Open Access | Times Cited: 11

Photoacoustic Tomography with Temporal Encoding Reconstruction (PATTERN) for cross-modal individual analysis of the whole brain
Yuwen Chen, Haoyu Yang, Yan Luo, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 4

Connecto-informatics at the mesoscale: current advances in image processing and analysis for mapping the brain connectivity
Yoon Kyoung Choi, Linqing Feng, Won-Ki Jeong, et al.
Brain Informatics (2024) Vol. 11, Iss. 1
Open Access | Times Cited: 4

SOLID: minimizing tissue distortion for brain-wide profiling of diverse architectures
Jingtan Zhu, Xiaomei Liu, Zhang Liu, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 4

Connectivity of single neurons classifies cell subtypes in mouse brains
Lijuan Liu, Zhixi Yun, Linus Manubens-Gil, et al.
Nature Methods (2025)
Open Access

Non-homogenous axonal bouton distribution in whole-brain single-cell neuronal networks
Penghao Qian, Linus Manubens-Gil, Shengdian Jiang, et al.
Cell Reports (2024) Vol. 43, Iss. 3, pp. 113871-113871
Open Access | Times Cited: 3

Localization and Registration of 2D Histological Mouse Brain Images in 3D Atlas Space
Maryam Sadeghi, Arnau Ramos-Prats, Pedro C. Neto, et al.
Neuroinformatics (2023) Vol. 21, Iss. 3, pp. 615-630
Open Access | Times Cited: 7

Full-Spectrum Neuronal Diversity and Stereotypy through Whole Brain Morphometry
Hanchuan Peng, Yufeng Liu, Shengdian Jiang, et al.
Research Square (Research Square) (2023)
Open Access | Times Cited: 7

SOmicsFusion: Multimodal coregistration and fusion between spatial metabolomics and biomedical imaging
Ang Guo, Zhiyu Chen, Yinzhong Ma, et al.
Artificial Intelligence Chemistry (2024) Vol. 2, Iss. 1, pp. 100058-100058
Open Access | Times Cited: 2

An MR-based brain template and atlas for optical projection tomography and light sheet fluorescence microscopy in neuroscience
Stefanie M. A. Willekens, Federico Morini, Tomás Mediavilla, et al.
Frontiers in Neuroscience (2024) Vol. 18
Open Access | Times Cited: 2

Neuronal diversity and stereotypy at multiple scales through whole brain morphometry
Yufeng Liu, Shengdian Jiang, Yingxin Li, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 2

Optical Imaging of Dynamic Collagen Processes in Health and Disease
Leanne E. Iannucci, Charles S. Dranoff, Michael A. David, et al.
Frontiers in Mechanical Engineering (2022) Vol. 8
Open Access | Times Cited: 11

BIFROST: a method for registering diverse imaging datasets of theDrosophilabrain
Bella E. Brezovec, Andrew B. Berger, Yukun A. Hao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6

Waxholm Space atlas of the rat brain: A 3D atlas supporting data analysis and integration
Heidi Kleven, Ingvild E. Bjerke, Francisco Clascá, et al.
Research Square (Research Square) (2023)
Open Access | Times Cited: 5

An anatomical and connectivity atlas of the marmoset cerebellum
Xiaojia Zhu, Haotian Yan, Yafeng Zhan, et al.
Cell Reports (2023) Vol. 42, Iss. 5, pp. 112480-112480
Open Access | Times Cited: 5

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