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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Macromolecular modeling and design in Rosetta: recent methods and frameworks
Julia Koehler Leman, Brian D. Weitzner, Steven M. Lewis, et al.
Nature Methods (2020) Vol. 17, Iss. 7, pp. 665-680
Open Access | Times Cited: 703

Showing 1-25 of 703 citing articles:

UCSF ChimeraX: Tools for structure building and analysis
Elaine C. Meng, Thomas D. Goddard, Eric F. Pettersen, et al.
Protein Science (2023) Vol. 32, Iss. 11
Open Access | Times Cited: 1279
Robust deep learning–based protein sequence design using ProteinMPNN
Justas Dauparas, Ivan Anishchenko, Nathaniel R. Bennett, et al.
Science (2022) Vol. 378, Iss. 6615, pp. 49-56
Open Access | Times Cited: 789
BenchmarkingAlphaFoldfor protein complex modeling reveals accuracy determinants
Rui Yin, Brandon Y. Feng, Amitabh Varshney, et al.
Protein Science (2022) Vol. 31, Iss. 8
Open Access | Times Cited: 252
In vivo structural characterization of the SARS-CoV-2 RNA genome identifies host proteins vulnerable to repurposed drugs
Lei Sun, Pan Li, Xiaohui Ju, et al.
Cell (2021) Vol. 184, Iss. 7, pp. 1865-1883.e20
Open Access | Times Cited: 214
Machine learning in protein structure prediction
Mohammed AlQuraishi
Current Opinion in Chemical Biology (2021) Vol. 65, pp. 1-8
Open Access | Times Cited: 213
Cross-Linking Mass Spectrometry for Investigating Protein Conformations and Protein–Protein Interactions─A Method for All Seasons
Lolita Piersimoni, Panagiotis L. Kastritis, Christian Arlt, et al.
Chemical Reviews (2021) Vol. 122, Iss. 8, pp. 7500-7531
Open Access | Times Cited: 190
Antibody structure prediction using interpretable deep learning
Jeffrey A. Ruffolo, Jeremias Sulam, Jeffrey J. Gray
Patterns (2021) Vol. 3, Iss. 2, pp. 100406-100406
Open Access | Times Cited: 158
The impact of AlphaFold2 one year on
David T. Jones, Janet M. Thornton
Nature Methods (2022) Vol. 19, Iss. 1, pp. 15-20
Open Access | Times Cited: 150
Structure of Hsp90–Hsp70–Hop–GR reveals the Hsp90 client-loading mechanism
Ray Yu‐Ruei Wang, Chari M. Noddings, Elaine Kirschke, et al.
Nature (2021) Vol. 601, Iss. 7893, pp. 460-464
Open Access | Times Cited: 145
Protein Design: From the Aspect of Water Solubility and Stability
Rui Qing, Shilei Hao, Eva Smorodina, et al.
Chemical Reviews (2022) Vol. 122, Iss. 18, pp. 14085-14179
Open Access | Times Cited: 142
Designed proteins assemble antibodies into modular nanocages
Robby Divine, Ha V. Dang, George Ueda, et al.
Science (2021) Vol. 372, Iss. 6537
Open Access | Times Cited: 134
A Brief History of De Novo Protein Design: Minimal, Rational, and Computational
Derek N. Woolfson
Journal of Molecular Biology (2021) Vol. 433, Iss. 20, pp. 167160-167160
Open Access | Times Cited: 123
Language models generalize beyond natural proteins
Robert Verkuil, Ori Kabeli, Yilun Du, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 123
Rationalizing PROTAC-Mediated Ternary Complex Formation Using Rosetta
Nan Bai, Sven A. Miller, Grigorii Andrianov, et al.
Journal of Chemical Information and Modeling (2021) Vol. 61, Iss. 3, pp. 1368-1382
Open Access | Times Cited: 119
Engineering cytokine therapeutics
Jeroen Deckers, Tom Anbergen, Ayla M. Hokke, et al.
Nature Reviews Bioengineering (2023) Vol. 1, Iss. 4, pp. 286-303
Open Access | Times Cited: 119
Can we predict T cell specificity with digital biology and machine learning?
D. R. Hudson, Ricardo A. Fernandes, Mark Basham, et al.
Nature reviews. Immunology (2023) Vol. 23, Iss. 8, pp. 511-521
Open Access | Times Cited: 117
Modeling conformational states of proteins with AlphaFold
Davide Sala, Felipe Engelberger, Hassane S. Mchaourab, et al.
Current Opinion in Structural Biology (2023) Vol. 81, pp. 102645-102645
Open Access | Times Cited: 108
Predicting and interpreting large-scale mutagenesis data using analyses of protein stability and conservation
Magnus Haraldson Høie, Matteo Cagiada, Anders Haagen Beck Frederiksen, et al.
Cell Reports (2022) Vol. 38, Iss. 2, pp. 110207-110207
Open Access | Times Cited: 107
Deep learning guided optimization of human antibody against SARS-CoV-2 variants with broad neutralization
Sisi Shan, Shitong Luo, Ziqing Yang, et al.
Proceedings of the National Academy of Sciences (2022) Vol. 119, Iss. 11
Open Access | Times Cited: 101
Recent advances in green synthesized nanoparticles: from production to application
Saeedeh Kazemi, A. Hosseingholian, Sheida Gohari, et al.
Materials Today Sustainability (2023) Vol. 24, pp. 100500-100500
Open Access | Times Cited: 96
Computational and artificial intelligence-based methods for antibody development
Ji‐Sun Kim, Matthew McFee, Qiao Fang, et al.
Trends in Pharmacological Sciences (2023) Vol. 44, Iss. 3, pp. 175-189
Open Access | Times Cited: 89
In vivo hypermutation and continuous evolution
Rosana S. Molina, Gordon Rix, Amanuella A. Mengiste, et al.
Nature Reviews Methods Primers (2022) Vol. 2, Iss. 1
Open Access | Times Cited: 83
Progress and challenges for the machine learning-based design of fit-for-purpose monoclonal antibodies
Rahmad Akbar, Habib Bashour, Puneet Rawat, et al.
mAbs (2022) Vol. 14, Iss. 1
Open Access | Times Cited: 82
De novo design of high-affinity binders of bioactive helical peptides
Susana Vázquez Torres, Philip J. Y. Leung, Preetham Venkatesh, et al.
Nature (2023) Vol. 626, Iss. 7998, pp. 435-442
Open Access | Times Cited: 82
Game changers in science and technology - now and beyond
Ulrich A. K. Betz, Loukik Arora, R.A. Assal, et al.
Technological Forecasting and Social Change (2023) Vol. 193, pp. 122588-122588
Open Access | Times Cited: 69
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