OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Souporcell: robust clustering of single-cell RNA-seq data by genotype without reference genotypes
Haynes Heaton, Arthur M. Talman, Andrew Knights, et al.
Nature Methods (2020) Vol. 17, Iss. 6, pp. 615-620
Open Access | Times Cited: 349

Showing 1-25 of 349 citing articles:

SoupX removes ambient RNA contamination from droplet-based single-cell RNA sequencing data
Matthew D. Young, Sam Behjati
GigaScience (2020) Vol. 9, Iss. 12
Open Access | Times Cited: 977

Circuits between infected macrophages and T cells in SARS-CoV-2 pneumonia
Rogan A. Grant, Luisa Morales‐Nebreda, Nikolay S. Markov, et al.
Nature (2021) Vol. 590, Iss. 7847, pp. 635-641
Open Access | Times Cited: 645

Single-cell multi-omics analysis of the immune response in COVID-19
Emily Stephenson, Gary Reynolds, Rachel A. Botting, et al.
Nature Medicine (2021) Vol. 27, Iss. 5, pp. 904-916
Open Access | Times Cited: 597

Mapping the temporal and spatial dynamics of the human endometrium in vivo and in vitro
Luz García‐Alonso, Louis‐François Handfield, Kenny Roberts, et al.
Nature Genetics (2021) Vol. 53, Iss. 12, pp. 1698-1711
Open Access | Times Cited: 394

SARS-CoV-2 infection triggers profibrotic macrophage responses and lung fibrosis
Daniel Wendisch, Oliver Dietrich, Tommaso Mari, et al.
Cell (2021) Vol. 184, Iss. 26, pp. 6243-6261.e27
Open Access | Times Cited: 392

A human cell atlas of fetal chromatin accessibility
Silvia Domcke, Andrew J. Hill, Riza M. Daza, et al.
Science (2020) Vol. 370, Iss. 6518
Open Access | Times Cited: 344

An integrated cell atlas of the lung in health and disease
Lisa Sikkema, Ciro Ramírez-Suástegui, Daniel Strobl, et al.
Nature Medicine (2023) Vol. 29, Iss. 6, pp. 1563-1577
Open Access | Times Cited: 310

Single-nucleus cross-tissue molecular reference maps toward understanding disease gene function
Gökçen Eraslan, Eugene Drokhlyansky, Shankara Anand, et al.
Science (2022) Vol. 376, Iss. 6594
Open Access | Times Cited: 264

Local and systemic responses to SARS-CoV-2 infection in children and adults
Masahiro Yoshida, Kaylee B. Worlock, Ni Huang, et al.
Nature (2021) Vol. 602, Iss. 7896, pp. 321-327
Open Access | Times Cited: 245

Mapping the developing human immune system across organs
Chenqu Suo, Emma Dann, Issac Goh, et al.
Science (2022) Vol. 376, Iss. 6597
Open Access | Times Cited: 220

CRISPR activation and interference screens decode stimulation responses in primary human T cells
Ralf Schmidt, Zachary Steinhart, Madeline Layeghi, et al.
Science (2022) Vol. 375, Iss. 6580
Open Access | Times Cited: 182

Ultra-high-throughput single-cell RNA sequencing and perturbation screening with combinatorial fluidic indexing
Paul Datlinger, André F. Rendeiro, Thorina Boenke, et al.
Nature Methods (2021) Vol. 18, Iss. 6, pp. 635-642
Open Access | Times Cited: 181

The single-cell eQTLGen consortium
Monique G.P. van der Wijst, DH de Vries, Hilde E. Groot, et al.
eLife (2020) Vol. 9
Open Access | Times Cited: 180

Maternal-fetal immune responses in pregnant women infected with SARS-CoV-2
Valeria Garcia‐Flores, Roberto Romero, Yi Xu, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 175

Single-cell CUT&Tag analysis of chromatin modifications in differentiation and tumor progression
Steven J. Wu, Scott N. Furlan, Anca B. Mihalas, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 7, pp. 819-824
Open Access | Times Cited: 158

Spatially resolved multiomics of human cardiac niches
Kazumasa Kanemaru, James Cranley, Daniele Muraro, et al.
Nature (2023) Vol. 619, Iss. 7971, pp. 801-810
Open Access | Times Cited: 129

Induction of trained immunity by influenza vaccination - impact on COVID-19
Priya A. Debisarun, Katharina L. Gössling, Özlem Bulut, et al.
PLoS Pathogens (2021) Vol. 17, Iss. 10, pp. e1009928-e1009928
Open Access | Times Cited: 125

Spatial multiomics map of trophoblast development in early pregnancy
Anna Arutyunyan, Kenny Roberts, Kevin Troulé, et al.
Nature (2023) Vol. 616, Iss. 7955, pp. 143-151
Open Access | Times Cited: 117

Signature of long-lived memory CD8+ T cells in acute SARS-CoV-2 infection
Sarah Adamo, Jan Michler, Yves Zurbuchen, et al.
Nature (2021) Vol. 602, Iss. 7895, pp. 148-155
Open Access | Times Cited: 114

A human fetal lung cell atlas uncovers proximal-distal gradients of differentiation and key regulators of epithelial fates
Peng He, Kyungtae Lim, Dawei Sun, et al.
Cell (2022) Vol. 185, Iss. 25, pp. 4841-4860.e25
Open Access | Times Cited: 112

Pre-existing Castration-resistant Prostate Cancer–like Cells in Primary Prostate Cancer Promote Resistance to Hormonal Therapy
Qing Cheng, William Butler, Yinglu Zhou, et al.
European Urology (2022) Vol. 81, Iss. 5, pp. 446-455
Open Access | Times Cited: 92

An inflammatory state remodels the immune microenvironment and improves risk stratification in acute myeloid leukemia
Audrey Lasry, Bettina Nadorp, Maarten Fornerod, et al.
Nature Cancer (2022)
Open Access | Times Cited: 83

An integrated cell atlas of the human lung in health and disease
Lisa Sikkema, Daniel Strobl, Luke Zappia, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 80

Fibroblast inflammatory priming determines regenerative versus fibrotic skin repair in reindeer
Sarthak Sinha, Holly D. Sparks, Elodie Labit, et al.
Cell (2022) Vol. 185, Iss. 25, pp. 4717-4736.e25
Open Access | Times Cited: 76

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