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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Modular, efficient and constant-memory single-cell RNA-seq preprocessing
Páll Melsted, A. Sina Booeshaghi, Lauren P. Liu, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 7, pp. 813-818
Open Access | Times Cited: 346
Páll Melsted, A. Sina Booeshaghi, Lauren P. Liu, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 7, pp. 813-818
Open Access | Times Cited: 346
Showing 1-25 of 346 citing articles:
STARsolo: accurate, fast and versatile mapping/quantification of single-cell and single-nucleus RNA-seq data
Benjamin Kaminow, Dinar Yunusov, Alexander Dobin
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 283
Benjamin Kaminow, Dinar Yunusov, Alexander Dobin
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 283
hdWGCNA identifies co-expression networks in high-dimensional transcriptomics data
Samuel Morabito, Fairlie Reese, Negin Rahimzadeh, et al.
Cell Reports Methods (2023) Vol. 3, Iss. 6, pp. 100498-100498
Open Access | Times Cited: 222
Samuel Morabito, Fairlie Reese, Negin Rahimzadeh, et al.
Cell Reports Methods (2023) Vol. 3, Iss. 6, pp. 100498-100498
Open Access | Times Cited: 222
Maternal-fetal immune responses in pregnant women infected with SARS-CoV-2
Valeria Garcia‐Flores, Roberto Romero, Yi Xu, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 175
Valeria Garcia‐Flores, Roberto Romero, Yi Xu, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 175
A genome-scale screen for synthetic drivers of T cell proliferation
Mateusz Legut, Zoran Gajic, Maria Guarino, et al.
Nature (2022) Vol. 603, Iss. 7902, pp. 728-735
Open Access | Times Cited: 130
Mateusz Legut, Zoran Gajic, Maria Guarino, et al.
Nature (2022) Vol. 603, Iss. 7902, pp. 728-735
Open Access | Times Cited: 130
Systematic reconstruction of cellular trajectories across mouse embryogenesis
Chengxiang Qiu, Junyue Cao, Beth Martin, et al.
Nature Genetics (2022) Vol. 54, Iss. 3, pp. 328-341
Open Access | Times Cited: 129
Chengxiang Qiu, Junyue Cao, Beth Martin, et al.
Nature Genetics (2022) Vol. 54, Iss. 3, pp. 328-341
Open Access | Times Cited: 129
Thymic epithelial cells co-opt lineage-defining transcription factors to eliminate autoreactive T cells
Daniel A. Michelson, Koji Hase, Tsuneyasu Kaisho, et al.
Cell (2022) Vol. 185, Iss. 14, pp. 2542-2558.e18
Open Access | Times Cited: 123
Daniel A. Michelson, Koji Hase, Tsuneyasu Kaisho, et al.
Cell (2022) Vol. 185, Iss. 14, pp. 2542-2558.e18
Open Access | Times Cited: 123
Normalizing and denoising protein expression data from droplet-based single cell profiling
Matthew P. Mulè, Andrew J. Martins, John S. Tsang
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 116
Matthew P. Mulè, Andrew J. Martins, John S. Tsang
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 116
Pluripotent stem cell-derived model of the post-implantation human embryo
Bailey A. T. Weatherbee, Carlos W. Gantner, Lisa K. Iwamoto-Stohl, et al.
Nature (2023) Vol. 622, Iss. 7983, pp. 584-593
Open Access | Times Cited: 116
Bailey A. T. Weatherbee, Carlos W. Gantner, Lisa K. Iwamoto-Stohl, et al.
Nature (2023) Vol. 622, Iss. 7983, pp. 584-593
Open Access | Times Cited: 116
RNA velocity unraveled
Gennady Gorin, Meichen Fang, Tara Chari, et al.
PLoS Computational Biology (2022) Vol. 18, Iss. 9, pp. e1010492-e1010492
Open Access | Times Cited: 111
Gennady Gorin, Meichen Fang, Tara Chari, et al.
PLoS Computational Biology (2022) Vol. 18, Iss. 9, pp. e1010492-e1010492
Open Access | Times Cited: 111
A functional cellular framework for sex and estrous cycle-dependent gene expression and behavior
Joseph R. Knoedler, Sayaka Inoue, Daniel W. Bayless, et al.
Cell (2022) Vol. 185, Iss. 4, pp. 654-671.e22
Open Access | Times Cited: 101
Joseph R. Knoedler, Sayaka Inoue, Daniel W. Bayless, et al.
Cell (2022) Vol. 185, Iss. 4, pp. 654-671.e22
Open Access | Times Cited: 101
Clonal expansion and epigenetic inheritance of long-lasting NK cell memory
Timo Rückert, Caleb A. Lareau, Mir‐Farzin Mashreghi, et al.
Nature Immunology (2022) Vol. 23, Iss. 11, pp. 1551-1563
Open Access | Times Cited: 98
Timo Rückert, Caleb A. Lareau, Mir‐Farzin Mashreghi, et al.
Nature Immunology (2022) Vol. 23, Iss. 11, pp. 1551-1563
Open Access | Times Cited: 98
Tissue adaptation and clonal segregation of human memory T cells in barrier sites
Maya M.L. Poon, Daniel P. Caron, Zicheng Wang, et al.
Nature Immunology (2023) Vol. 24, Iss. 2, pp. 309-319
Open Access | Times Cited: 97
Maya M.L. Poon, Daniel P. Caron, Zicheng Wang, et al.
Nature Immunology (2023) Vol. 24, Iss. 2, pp. 309-319
Open Access | Times Cited: 97
Triple-negative breast cancer metastasis involves complex epithelial-mesenchymal transition dynamics and requires vimentin
Eloïse M. Grasset, Matthew Dunworth, Gaurav Sharma, et al.
Science Translational Medicine (2022) Vol. 14, Iss. 656
Open Access | Times Cited: 96
Eloïse M. Grasset, Matthew Dunworth, Gaurav Sharma, et al.
Science Translational Medicine (2022) Vol. 14, Iss. 656
Open Access | Times Cited: 96
An allosteric pan-TEAD inhibitor blocks oncogenic YAP/TAZ signaling and overcomes KRAS G12C inhibitor resistance
Thijs J. Hagenbeek, Jason R. Zbieg, Marc Hafner, et al.
Nature Cancer (2023) Vol. 4, Iss. 6, pp. 812-828
Open Access | Times Cited: 82
Thijs J. Hagenbeek, Jason R. Zbieg, Marc Hafner, et al.
Nature Cancer (2023) Vol. 4, Iss. 6, pp. 812-828
Open Access | Times Cited: 82
Functional regulatory variants implicate distinct transcriptional networks in dementia
Yonatan A. Cooper, Noam Teyssier, Nina M. Dräger, et al.
Science (2022) Vol. 377, Iss. 6608
Open Access | Times Cited: 80
Yonatan A. Cooper, Noam Teyssier, Nina M. Dräger, et al.
Science (2022) Vol. 377, Iss. 6608
Open Access | Times Cited: 80
Computational solutions for spatial transcriptomics
Iivari Kleino, Paulina Frolovaitė, Tomi Suomi, et al.
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 4870-4884
Open Access | Times Cited: 78
Iivari Kleino, Paulina Frolovaitė, Tomi Suomi, et al.
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 4870-4884
Open Access | Times Cited: 78
Brassinosteroid gene regulatory networks at cellular resolution in the Arabidopsis root
Trevor M. Nolan, Nemanja Vukašinović, Che‐Wei Hsu, et al.
Science (2023) Vol. 379, Iss. 6639
Open Access | Times Cited: 72
Trevor M. Nolan, Nemanja Vukašinović, Che‐Wei Hsu, et al.
Science (2023) Vol. 379, Iss. 6639
Open Access | Times Cited: 72
Single-cell analyses of axolotl telencephalon organization, neurogenesis, and regeneration
Katharina Lust, Ashley Maynard, Tomás Gomes, et al.
Science (2022) Vol. 377, Iss. 6610
Closed Access | Times Cited: 66
Katharina Lust, Ashley Maynard, Tomás Gomes, et al.
Science (2022) Vol. 377, Iss. 6610
Closed Access | Times Cited: 66
scAAGA: Single cell data analysis framework using asymmetric autoencoder with gene attention
Rui Meng, Shuaidong Yin, Jianqiang Sun, et al.
Computers in Biology and Medicine (2023) Vol. 165, pp. 107414-107414
Closed Access | Times Cited: 66
Rui Meng, Shuaidong Yin, Jianqiang Sun, et al.
Computers in Biology and Medicine (2023) Vol. 165, pp. 107414-107414
Closed Access | Times Cited: 66
Alevin-fry unlocks rapid, accurate and memory-frugal quantification of single-cell RNA-seq data
Dongze He, Mohsen Zakeri, Hirak Sarkar, et al.
Nature Methods (2022) Vol. 19, Iss. 3, pp. 316-322
Open Access | Times Cited: 65
Dongze He, Mohsen Zakeri, Hirak Sarkar, et al.
Nature Methods (2022) Vol. 19, Iss. 3, pp. 316-322
Open Access | Times Cited: 65
Deep generative modeling of transcriptional dynamics for RNA velocity analysis in single cells
Adam Gayoso, Philipp Weiler, Mohammad Lotfollahi, et al.
Nature Methods (2023) Vol. 21, Iss. 1, pp. 50-59
Open Access | Times Cited: 45
Adam Gayoso, Philipp Weiler, Mohammad Lotfollahi, et al.
Nature Methods (2023) Vol. 21, Iss. 1, pp. 50-59
Open Access | Times Cited: 45
Radiation-induced circulating myeloid-derived suppressor cells induce systemic lymphopenia after chemoradiotherapy in patients with glioblastoma
Subhajit Ghosh, Jiayi Huang, Matthew Inkman, et al.
Science Translational Medicine (2023) Vol. 15, Iss. 680
Open Access | Times Cited: 42
Subhajit Ghosh, Jiayi Huang, Matthew Inkman, et al.
Science Translational Medicine (2023) Vol. 15, Iss. 680
Open Access | Times Cited: 42
Genome organization around nuclear speckles drives mRNA splicing efficiency
Prashant Bhat, Amy Chow, Benjamin Emert, et al.
Nature (2024) Vol. 629, Iss. 8014, pp. 1165-1173
Closed Access | Times Cited: 42
Prashant Bhat, Amy Chow, Benjamin Emert, et al.
Nature (2024) Vol. 629, Iss. 8014, pp. 1165-1173
Closed Access | Times Cited: 42
scONE-seq: A single-cell multi-omics method enables simultaneous dissection of phenotype and genotype heterogeneity from frozen tumors
Lei Yu, Xinlei Wang, Quanhua Mu, et al.
Science Advances (2023) Vol. 9, Iss. 1
Open Access | Times Cited: 37
Lei Yu, Xinlei Wang, Quanhua Mu, et al.
Science Advances (2023) Vol. 9, Iss. 1
Open Access | Times Cited: 37
Therapeutic targeting of cellular senescence in diabetic macular edema: preclinical and phase 1 trial results
Sergio Crespo‐Garcia, Frédérik Fournier, Roberto Diaz-Marin, et al.
Nature Medicine (2024) Vol. 30, Iss. 2, pp. 443-454
Closed Access | Times Cited: 24
Sergio Crespo‐Garcia, Frédérik Fournier, Roberto Diaz-Marin, et al.
Nature Medicine (2024) Vol. 30, Iss. 2, pp. 443-454
Closed Access | Times Cited: 24