OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Deep-learning-enabled antibiotic discovery through molecular de-extinction
Fangping Wan, Marcelo D. T. Torres, Jacqueline Peng, et al.
Nature Biomedical Engineering (2024) Vol. 8, Iss. 7, pp. 854-871
Open Access | Times Cited: 36

Showing 1-25 of 36 citing articles:

Mining human microbiomes reveals an untapped source of peptide antibiotics
Marcelo D. T. Torres, Erin F. Brooks, Angela Cesaro, et al.
Cell (2024) Vol. 187, Iss. 19, pp. 5453-5467.e15
Open Access | Times Cited: 30

Antimicrobial resistance: a concise update
Charlotte Shan Ho, Carlos T H Wong, Thet Tun Aung, et al.
The Lancet Microbe (2024), pp. 100947-100947
Open Access | Times Cited: 16

Five ways science is tackling the antibiotic resistance crisis
Amber Dance
Nature (2024) Vol. 632, Iss. 8025, pp. 494-496
Open Access | Times Cited: 8

From Data to Decisions: Leveraging Artificial Intelligence and Machine Learning in Combating Antimicrobial Resistance – a Comprehensive Review
José Manuel Pérez de la Lastra, Samuel J. T. Wardell, Tarun Pal, et al.
Journal of Medical Systems (2024) Vol. 48, Iss. 1
Open Access | Times Cited: 7

AI Methods for Antimicrobial Peptides: Progress and Challenges
Carlos A. Brizuela, Gary Liu, J Stokes, et al.
Microbial Biotechnology (2025) Vol. 18, Iss. 1
Open Access

The Significant Role of Peptide Synthesis in the Early Days of Antimicrobial Peptide Research
David Andreu
International Journal of Peptide Research and Therapeutics (2025) Vol. 31, Iss. 2
Closed Access

A novel antibiotic class targeting the enolase of Acinetobacter baumannii
Younes Smani, Irene Molina Panadero, Ana Rodrı́guez, et al.
Research Square (Research Square) (2025)
Closed Access

Challenges and applications of artificial intelligence in infectious diseases and antimicrobial resistance
Angela Cesaro, Samuel C. Hoffman, Payel Das, et al.
npj Antimicrobials and Resistance (2025) Vol. 3, Iss. 1
Open Access

Improving functional protein generation via foundation model-derived latent space likelihood optimization
Changge Guan, Fangping Wan, Marcelo D. T. Torres, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access

Microproteins: emerging roles as antibiotics
Benjamin Galeota-Sprung, Ami S. Bhatt, César de la Fuente‐Núñez
Trends in Genetics (2025)
Closed Access

Small and Versatile Cyclotides as Anti-infective Agents
Elizabete de Souza Cândido, Liryel Silva Gasparetto, Lívia V. Luchi, et al.
ACS Infectious Diseases (2025)
Open Access

Artificial intelligence using a latent diffusion model enables the generation of diverse and potent antimicrobial peptides
Y. C. Wang, Minghui Song, Fen Liu, et al.
Science Advances (2025) Vol. 11, Iss. 6
Closed Access

A breakthrough computational strategy for efficient enzymatic digestion of walnut protein to prepare antioxidant peptides
Like Lin, Dan Xiao, Wei Song, et al.
Food Chemistry (2025), pp. 143311-143311
Closed Access

Peptides from non-immune proteins target infections through antimicrobial and immunomodulatory properties
Marcelo D. T. Torres, Angela Cesaro, César de la Fuente‐Núñez
Trends in biotechnology (2024)
Open Access | Times Cited: 4

Discovery of antibiotics in the archaeome using deep learning
Marcelo D. T. Torres, Fangping Wan, César de la Fuente‐Núñez
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2

Defensins identified through molecular de-extinction
Adryan F.L. Ferreira, Karen Ofuji Osiro, Kamila Botelho Sampaio de Oliveira, et al.
Cell Reports Physical Science (2024) Vol. 5, Iss. 9, pp. 102193-102193
Open Access | Times Cited: 1

MicroEpitope: an atlas of immune epitopes derived from cancer microbiomes
Donghao Li, Yangyang Cai, K. Y. Liu, et al.
Nucleic Acids Research (2024) Vol. 53, Iss. D1, pp. D1435-D1442
Open Access | Times Cited: 1

Integrated computational approaches for advancing antimicrobial peptide development
Yanpeng Fang, Yeshuo Ma, Kunqian Yu, et al.
Trends in Pharmacological Sciences (2024) Vol. 45, Iss. 11, pp. 1046-1060
Closed Access | Times Cited: 1

The patentability and bioethics of molecular de-extinction
Andrew W. Torrance, César de la Fuente‐Núñez
Nature Biotechnology (2024) Vol. 42, Iss. 8, pp. 1179-1180
Closed Access

Catastrophic selection: the other side of the coin
José de la Fuente
Annals of Medicine (2024) Vol. 56, Iss. 1
Open Access

Machine Learning Accelerates the Discovery of Epitope-based Dual-bioactive Peptides Against Skin Infections
Le Fu, Zheng Xu, Jiawen Luo, et al.
International Journal of Antimicrobial Agents (2024), pp. 107371-107371
Open Access

Computational Approaches for Antimicrobial Peptide Delivery
Thuanny Borba Rios, Samilla B. Rezende, Mariana Rocha Maximiano, et al.
Bioconjugate Chemistry (2024)
Closed Access

Antimicrobial peptides and proteins against drug-resistant pathogens
Y. C. Wang, Minghui Song, Wenqiang Chang
The Cell Surface (2024) Vol. 12, pp. 100135-100135
Open Access

A generative artificial intelligence approach for antibiotic optimization
Marcelo D. T. Torres, Yimeng Zeng, Fangping Wan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

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