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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

scMoMaT jointly performs single cell mosaic integration and multi-modal bio-marker detection
Ziqi Zhang, Haoran Sun, Ragunathan Mariappan, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 21

Showing 21 citing articles:

scGPT: toward building a foundation model for single-cell multi-omics using generative AI
Haotian Cui, Xiaoming Wang, Hassaan Maan, et al.
Nature Methods (2024) Vol. 21, Iss. 8, pp. 1470-1480
Open Access | Times Cited: 262
Mosaic integration and knowledge transfer of single-cell multimodal data with MIDAS
眞智子 平賀, Shuofeng Hu, Yaowen Chen, et al.
Nature Biotechnology (2024) Vol. 42, Iss. 10, pp. 1594-1605
Open Access | Times Cited: 24
Benchmarking algorithms for joint integration of unpaired and paired single-cell RNA-seq and ATAC-seq data
Michelle Y. Y. Lee, Klaus H. Kaestner, Mingyao Li
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 25
Benchmarking algorithms for single-cell multi-omics prediction and integration
Yinlei Hu, Siyuan Wan, Yuanhanyu Luo, et al.
Nature Methods (2024)
Closed Access | Times Cited: 9
Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases
Anastasia Litinetskaya, Maiia Shulman, Soroor Hediyeh-zadeh, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
Integration and Querying of Multimodal Single-Cell Data with PoE-VAE
Anastasia Litinetskaya, Maiia Shulman, Fabiola Curion, et al.
Lecture notes in computer science (2025), pp. 345-348
Closed Access
InClust+: the deep generative framework with mask modules for multimodal data integration, imputation, and cross-modal generation
Lifei Wang, Rui Nie, Xuexia Miao, et al.
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 3
scMoMtF: An interpretable multitask learning framework for single-cell multi-omics data analysis
Wei Lan, T. Y. Ling, Qingfeng Chen, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 12, pp. e1012679-e1012679
Open Access | Times Cited: 2
Reliable imputation of spatial transcriptomes with uncertainty estimation and spatial regularization
Chen Qiao, Yuanhua Huang
Patterns (2024) Vol. 5, Iss. 8, pp. 101021-101021
Open Access | Times Cited: 2
scParser: sparse representation learning for scalable single-cell RNA sequencing data analysis
Kai Zhao, Hon‐Cheong So, Zhixiang Lin
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 2
Mosaic integration of spatial multi-omics with SpaMosaic
Xuhua Yan, Min Li, Kok Siong Ang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Closed Access | Times Cited: 2
Considerations for building and using integrated single-cell atlases
Karin Hrovatin, Lisa Sikkema, Vladimir A. Shitov, et al.
Nature Methods (2024)
Closed Access | Times Cited: 2
Liam tackles complex multimodal single-cell data integration challenges
Pia Rautenstrauch, Uwe Ohler
Nucleic Acids Research (2024) Vol. 52, Iss. 12, pp. e52-e52
Open Access | Times Cited: 1
Data-driven batch detection enhances single-cell omics data analysis
Ziqi Zhang, Xiuwei Zhang
Cell Systems (2024) Vol. 15, Iss. 10, pp. 893-894
Closed Access | Times Cited: 1
mosaicMPI: a framework for modular data integration across cohorts and -omics modalities
Theodore B. Verhey, Heewon Seo, Aaron H. Gillmor, et al.
Nucleic Acids Research (2024) Vol. 52, Iss. 12, pp. e53-e53
Open Access
Single-cell mosaic integration and cell state transfer with auto-scaling self-attention mechanism.
Zhiwei Rong, Jiali Song, Yipei Yu, et al.
PubMed (2024) Vol. 25, Iss. 6
Closed Access
scMonica: Single-cell Mosaic Omics Nonlinear Integration and Clustering Analysis
Xiaoli Li, Rui Zhang, Saba Aslam, et al.
2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (2024), pp. 1579-1583
Closed Access
MIDAS: a deep generative model for mosaic integration and knowledge transfer of single-cell multimodal data
眞智子 平賀, Yaowen Chen, Shuofeng Hu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 1
Integrating multiple single-cell multi-omics samples with Smmit
Changxin Wan, Zhicheng Ji
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
mosaicMPI: a framework for modular data integration across cohorts and -omics modalities
Theodore B. Verhey, Heewon Seo, Aaron H. Gillmor, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
Multimodal generation of astrocyte by integrating single-cell multi-omics data via deep learning
Jiashun Mao, Jianmin Wang, Amir Zeb, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
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