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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Estimation of cell lineages in tumors from spatial transcriptomics data
Beibei Ru, Jinlin Huang, Yu Zhang, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 48

Showing 1-25 of 48 citing articles:

The diversification of methods for studying cell–cell interactions and communication
Erick Armingol, Hratch Baghdassarian, Nathan E. Lewis
Nature Reviews Genetics (2024) Vol. 25, Iss. 6, pp. 381-400
Closed Access | Times Cited: 51
Spatial transcriptomics in development and disease
Ran Zhou, Gaoxia Yang, Yan Zhang, et al.
Molecular Biomedicine (2023) Vol. 4, Iss. 1
Open Access | Times Cited: 26
Immune Resistance Mechanisms and the Road to Personalized Immunotherapy
Miles Piper, Harriet M. Kluger, Eytan Ruppin, et al.
American Society of Clinical Oncology Educational Book (2023), Iss. 43
Open Access | Times Cited: 17
Spatial transcriptomics: a new frontier in cancer research
Siyuan Huang, Linkun Ouyang, Junjie Tang, et al.
Clinical Cancer Bulletin (2024) Vol. 3, Iss. 1
Open Access | Times Cited: 7
An integrated single-cell and spatial transcriptomic atlas of thyroid cancer progression identifies prognostic fibroblast subpopulations
Matthew A. Loberg, George Xu, Sheau‐Chiann Chen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Deciphering ovarian cancer heterogeneity through spatial transcriptomics, single-cell profiling, and copy number variations
Songyun Li, Zhuo Wang, Hsien-Da Huang
PLoS ONE (2025) Vol. 20, Iss. 3, pp. e0317115-e0317115
Open Access
The Landscape of Malignant Transition: Unraveling Cancer Cell-of-Origin and Heterogeneous Tissue Microenvironment
Ruihan Luo, Jiajia Liu, Tiangang Wang, et al.
Cancer Letters (2025), pp. 217591-217591
Open Access
Spatial multi-omics analysis of tumor-stroma boundary cell features for predicting breast cancer progression and therapy response
Yuanyuan Wu, Youyang Shi, Zhanyang Luo, et al.
Frontiers in Cell and Developmental Biology (2025) Vol. 13
Open Access
scMalignantFinder distinguishes malignant cells in single-cell and spatial transcriptomics by leveraging cancer signatures
Qiaoni Yu, Yuanyuan Li, Yunqin Chen
Communications Biology (2025) Vol. 8, Iss. 1
Open Access
Benchmarking algorithms for spatially variable gene identification in spatial transcriptomics
Xuanwei Chen, Qinghua Ran, Junjie Tang, et al.
Bioinformatics (2025) Vol. 41, Iss. 4
Open Access
STopover captures spatial colocalization and interaction in the tumor microenvironment using topological analysis in spatial transcriptomics data
Sungwoo Bae, Hyekyoung Lee, Kwon Joong Na, et al.
Genome Medicine (2025) Vol. 17, Iss. 1
Open Access
Extracellular vesicle-derived miRNA-mediated cell–cell communication inference for single-cell transcriptomic data with miRTalk
Xin Shao, Lingqi Yu, Chengyu Li, et al.
Genome biology (2025) Vol. 26, Iss. 1
Open Access
The suppressive role of GLS in radiosensitivity and irradiation-induced immune response in LUAD: integrating bioinformatics and experimental insights
Peicheng Jiang, Zhifeng Jiang, Li Su, et al.
Frontiers in Immunology (2025) Vol. 16
Open Access
Molecular signature incorporating the immune microenvironment enhances thyroid cancer outcome prediction
George Xu, Matthew A. Loberg, Jean‐Nicolas Gallant, et al.
Cell Genomics (2023) Vol. 3, Iss. 10, pp. 100409-100409
Open Access | Times Cited: 10
The crosstalk role of CDKN2A between tumor progression and cuproptosis resistance in colorectal cancer
Xifu Cheng, Famin Yang, Yuanheng Li, et al.
Aging (2024) Vol. 16, Iss. 12, pp. 10512-10538
Open Access | Times Cited: 3
Dissecting the tumor microenvironment in response to immune checkpoint inhibitors via single-cell and spatial transcriptomics
Wendi Liu, Anusha Puri, Doris Fu, et al.
Clinical & Experimental Metastasis (2023) Vol. 41, Iss. 4, pp. 313-332
Open Access | Times Cited: 7
Answering open questions in biology using spatial genomics and structured methods
Siddhartha G. Jena, Archit Verma, Barbara E. Engelhardt
BMC Bioinformatics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 2
Spatial transcriptomics and single-nucleus RNA sequencing reveal a transcriptomic atlas of adult human spinal cord
Donghang Zhang, Yali Chen, Yiyong Wei, et al.
eLife (2024) Vol. 12
Open Access | Times Cited: 2
Systematic evaluation with practical guidelines for single-cell and spatially resolved transcriptomics data simulation under multiple scenarios
Hongrui Duo, Yinghong Li, Lan Yang, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 2
Crosstalk of T cells within the ovarian cancer microenvironment
Bovannak Stewen Chap, Nicolas Rayroux, Alizée J. Grimm, et al.
Trends in cancer (2024)
Open Access | Times Cited: 2
Spatial transcriptomics in human biomedical research and clinical application
Weining Hu, Yin Zhang, Junpu Mei, et al.
Current Medicine (2023) Vol. 2, Iss. 1
Open Access | Times Cited: 5
Tutorial: guidelines for manual cell type annotation of single-cell multi-omics datasets using interactive software
Yang Joon Kim, Alexander J. Tarashansky, Karen Liang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
Spatial transcriptomics and single-nucleus RNA sequencing reveal a transcriptomic atlas of adult human spinal cord
Donghang Zhang, Yali Chen, Yiyong Wei, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 4
An integrative pan-cancer analysis of the molecular characteristics of dietary restriction in tumour microenvironment
Xiaoyi Song, Jiaxing Wei, Yang Li, et al.
EBioMedicine (2024) Vol. 102, pp. 105078-105078
Open Access | Times Cited: 1
Single-cell Landscape of Malignant Transition: Unraveling Cancer Cell-of-Origin and Heterogeneous Tissue Microenvironment
Ruihan Luo, Jiajia Liu, Jianguo Wen, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 1
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