OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Retinal chromophore charge delocalization and confinement explain the extreme photophysics of Neorhodopsin
Riccardo Palombo, Leonardo Barneschi, Laura Pedraza‐González, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 31

Showing 1-25 of 31 citing articles:

Understanding neural circuit function through synaptic engineering
Ithai Rabinowitch, Daniel A. Colón‐Ramos, Michael Krieg
Nature reviews. Neuroscience (2024) Vol. 25, Iss. 2, pp. 131-139
Closed Access | Times Cited: 10

Retinal photoisomerization versus counterion protonation in light and dark-adapted bacteriorhodopsin and its primary photoproduct
Partha Malakar, Samira Gholami, Mohammad Aarabi, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 8

Surface hopping modeling of charge and energy transfer in active environments
Josene M. Toldo, Mariana T. do Casal, Elizete Ventura, et al.
Physical Chemistry Chemical Physics (2023) Vol. 25, Iss. 12, pp. 8293-8316
Open Access | Times Cited: 20

Mechanical Modulation of S0–S1 and S0–T1 Energy Gaps of 11-cis and All-trans Retinal Schiff Bases
Alejandro Jodra, Luis Manuel Frutos
The Journal of Physical Chemistry B (2025)
Closed Access

Fluorescent Rhodopsins: A Challenging Test for Cost-Effective QM/MM Approaches
Duccio Di Prima, Laura Pedraza‐González, Peter Reinholdt, et al.
The Journal of Physical Chemistry A (2025)
Closed Access

In Silico Study of a Bacteriorhodopsin/TiO2 Hybrid System at the Molecular Level
Mayra Avelar, Carmen Coppola, Alessio d’Ettorre, et al.
Journal of Chemical Theory and Computation (2025)
Closed Access

Generalization of Quantum-Trajectory Surface Hopping to Multiple Quantum States
Daeho Han, Craig C. Martens, Alexey V. Akimov
Journal of Chemical Theory and Computation (2025)
Closed Access

Picosecond quantum-classical dynamics reveals that the coexistence of light-induced microbial and animal chromophore rotary motion modulates the isomerization quantum yield of heliorhodopsin
Riccardo Palombo, Leonardo Barneschi, Laura Pedraza‐González, et al.
Physical Chemistry Chemical Physics (2024) Vol. 26, Iss. 13, pp. 10343-10356
Closed Access | Times Cited: 4

Benchmarking two-photon absorption strengths of rhodopsin chromophore models with CC3 and CCSD methodologies: An assessment of popular density functional approximations
Saruti Sirimatayanant, Tadeusz Andruniów
The Journal of Chemical Physics (2023) Vol. 158, Iss. 9
Closed Access | Times Cited: 10

Photochemistry of the Retinal Chromophore in Microbial Rhodopsins
Keiichi Inoue
The Journal of Physical Chemistry B (2023) Vol. 127, Iss. 43, pp. 9215-9222
Closed Access | Times Cited: 10

Rational Design of Far-Red Archaerhodopsin-3-Based Fluorescent Genetically Encoded Voltage Indicators: from Elucidation of the Fluorescence Mechanism in Archers to Novel Red-Shifted Variants
Dmitrii M. Nikolaev, Vladimir N. Mironov, Ekaterina M. Metelkina, et al.
ACS Physical Chemistry Au (2024) Vol. 4, Iss. 4, pp. 347-362
Open Access | Times Cited: 3

Automated QM/MM Screening of Rhodopsin Variants with Enhanced Fluorescence
Laura Pedraza‐González, Leonardo Barneschi, Michał Marszałek, et al.
Journal of Chemical Theory and Computation (2022) Vol. 19, Iss. 1, pp. 293-310
Closed Access | Times Cited: 14

Photoisomerization in rhodopsins: Shape-changing reactions of retinal at low temperatures
Hideki Kandori, Masahiro Sugiura, Kota Katayama
Chemical Physics Reviews (2024) Vol. 5, Iss. 3
Open Access | Times Cited: 2

Gravitationally-induced Wave Function Collapse Time for Molecules
A. A. Tomaz, Rafael S. Mattos, Mario Barbatti
Physical Chemistry Chemical Physics (2024) Vol. 26, Iss. 31, pp. 20785-20798
Open Access | Times Cited: 2

A semiempirical method optimized for modeling proteins
James J. P. Stewart, Anna C. Stewart
Journal of Molecular Modeling (2023) Vol. 29, Iss. 9
Open Access | Times Cited: 6

Diversity of rhodopsin cyclases in zoospore-forming fungi
Matthias Broser, W. F. Busse, Anika Spreen, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 44
Open Access | Times Cited: 5

Voltage Imaging with Engineered Proton-Pumping Rhodopsins: Insights from the Proton Transfer Pathway
Xin Meng, Srividya Ganapathy, Lars van Roemburg, et al.
ACS Physical Chemistry Au (2023) Vol. 3, Iss. 4, pp. 320-333
Open Access | Times Cited: 4

Experimental Assessment of the Electronic and Geometrical Structure of a Near-Infrared Absorbing and Highly Fluorescent Microbial Rhodopsin
Matthias Broser, Tadeusz Andruniów, Anastasia Kraskov, et al.
The Journal of Physical Chemistry Letters (2023) Vol. 14, Iss. 41, pp. 9291-9295
Open Access | Times Cited: 4

Nonadiabatic Excited State Molecular Dynamics with explicit solvent: NEXMD-SANDER implementation
Dustin A. Tracy, Sebastian Fernández-Alberti, Johan F. Galindo, et al.
(2024)
Open Access | Times Cited: 1

Nonadiabatic Excited-State Molecular Dynamics with an Explicit Solvent: NEXMD-SANDER Implementation
Dustin A. Tracy, Sebastian Fernández-Alberti, Johan F. Galindo, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 46, pp. 11426-11434
Closed Access | Times Cited: 1

Archaerhodopsin 3 is an Ideal Template for the Engineering of Highly Fluorescent Optogenetic Reporters
Krystyna Herasymenko, Danushka Walisinghe, Masae Konno, et al.
Chemical Science (2024) Vol. 16, Iss. 2, pp. 761-774
Open Access | Times Cited: 1

Non-adiabatic Couplings in Surface Hopping with Tight Binding Density Functional Theory: The Case of Molecular Motors
Gonzalo Díaz Mirón, Carlos R. Lien-Medrano, Debarshi Banerjee, et al.
Journal of Chemical Theory and Computation (2024)
Closed Access | Times Cited: 1

Reaction Dynamics in the Chrimson Channelrhodopsin: Observation of Product-State Evolution and Slow Diffusive Protein Motions
Ivo H. M. van Stokkum, Yusaku Hontani, Johannes Vierock, et al.
The Journal of Physical Chemistry Letters (2023) Vol. 14, Iss. 6, pp. 1485-1493
Open Access | Times Cited: 2

Automatic Rhodopsin Modeling with Multiple Protonation Microstates
Gustavo Cárdenas, Vincent Ledentu, Miquel Huix‐Rotllant, et al.
The Journal of Physical Chemistry A (2023) Vol. 127, Iss. 44, pp. 9365-9380
Open Access | Times Cited: 2

Photoisomerization pathway of the microbial rhodopsin chromophore in solution
Masahiro Sugiura, Hideki Kandori
Photochemical & Photobiological Sciences (2024) Vol. 23, Iss. 8, pp. 1435-1443
Open Access

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