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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Fully-automated and ultra-fast cell-type identification using specific marker combinations from single-cell transcriptomic data
Aleksandr Ianevski, Anil K. Giri, Tero Aittokallio
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 358

Showing 1-25 of 358 citing articles:

Long COVID manifests with T cell dysregulation, inflammation and an uncoordinated adaptive immune response to SARS-CoV-2
Kailin Yin, Michael J. Peluso, Xiaoyu Luo, et al.
Nature Immunology (2024) Vol. 25, Iss. 2, pp. 218-225
Open Access | Times Cited: 119
APOE4 impairs the microglial response in Alzheimer’s disease by inducing TGFβ-mediated checkpoints
Zhuoran Yin, Neta Rosenzweig, Kilian Kleemann, et al.
Nature Immunology (2023) Vol. 24, Iss. 11, pp. 1839-1853
Open Access | Times Cited: 75
Long COVID manifests with T cell dysregulation, inflammation, and an uncoordinated adaptive immune response to SARS-CoV-2
Kailin Yin, Michael J. Peluso, Xiaoyu Luo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 47
A Review of Single-Cell RNA-Seq Annotation, Integration, and Cell–Cell Communication
Changde Cheng, Wenan Chen, Hongjian Jin, et al.
Cells (2023) Vol. 12, Iss. 15, pp. 1970-1970
Open Access | Times Cited: 45
Assessing GPT-4 for cell type annotation in single-cell RNA-seq analysis
Wenpin Hou, Zhicheng Ji
Nature Methods (2024) Vol. 21, Iss. 8, pp. 1462-1465
Open Access | Times Cited: 43
Nucleus pulposus cells regulate macrophages in degenerated intervertebral discs via the integrated stress response-mediated CCL2/7-CCR2 signaling pathway
Shuo Tian, Xuanzuo Chen, Wei Wu, et al.
Experimental & Molecular Medicine (2024) Vol. 56, Iss. 2, pp. 408-421
Open Access | Times Cited: 14
Profiling cell identity and tissue architecture with single-cell and spatial transcriptomics
Gunsagar S. Gulati, Jeremy Philip D’Silva, Yunhe Liu, et al.
Nature Reviews Molecular Cell Biology (2024) Vol. 26, Iss. 1, pp. 11-31
Closed Access | Times Cited: 14
Data analysis guidelines for single-cell RNA-seq in biomedical studies and clinical applications
Min‐Ying Su, Tao Pan, Qiu-Zhen Chen, et al.
Military Medical Research (2022) Vol. 9, Iss. 1
Open Access | Times Cited: 52
Single-cell and single-nuclei RNA sequencing as powerful tools to decipher cellular heterogeneity and dysregulation in neurodegenerative diseases
Raquel Cuevas‐Díaz Durán, Juan Carlos González-Orozco, Iván Velasco, et al.
Frontiers in Cell and Developmental Biology (2022) Vol. 10
Open Access | Times Cited: 35
CIForm as a Transformer-based model for cell-type annotation of large-scale single-cell RNA-seq data
Jing Xu, Aidi Zhang, Fang Liu, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 4
Closed Access | Times Cited: 24
A Roadmap for the Human Gut Cell Atlas
Matthias Zilbauer, Kylie R. James, Mandeep Kaur, et al.
Nature Reviews Gastroenterology & Hepatology (2023) Vol. 20, Iss. 9, pp. 597-614
Open Access | Times Cited: 24
Pan-cancer classification of single cells in the tumour microenvironment
Ido Nofech-Mozes, David Soave, Philip Awadalla, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 23
Challenges and opportunities to computationally deconvolve heterogeneous tissue with varying cell sizes using single-cell RNA-sequencing datasets
Sean K. Maden, Sang Ho Kwon, Louise A. Huuki-Myers, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 23
Assessing GPT-4 for cell type annotation in single-cell RNA-seq analysis
Wenpin Hou, Zhicheng Ji
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 21
Complex Analysis of Single-Cell RNA Sequencing Data
Anna A. Khozyainova, Anna A. Valyaeva, Mikhail Arbatsky, et al.
Biochemistry (Moscow) (2023) Vol. 88, Iss. 2, pp. 231-252
Open Access | Times Cited: 20
scDeepInsight: a supervised cell-type identification method for scRNA-seq data with deep learning
Shangru Jia, Artem Lysenko, Keith A. Boroevich, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 5
Open Access | Times Cited: 20
The Extracellular Niche and Tumor Microenvironment Enhance KRAS Inhibitor Efficacy in Pancreatic Cancer
Vishnu Kumarasamy, Jianxin Wang, Costakis Frangou, et al.
Cancer Research (2024) Vol. 84, Iss. 7, pp. 1115-1132
Open Access | Times Cited: 10
Myelin plasticity in the ventral tegmental area is required for opioid reward
Belgin Yalçın, Matthew B. Pomrenze, Karen Malacon, et al.
Nature (2024) Vol. 630, Iss. 8017, pp. 677-685
Open Access | Times Cited: 9
Metabolic inflexibility promotes mitochondrial health during liver regeneration
Xun Wang, Cameron J. Menezes, Yuemeng Jia, et al.
Science (2024) Vol. 384, Iss. 6701
Open Access | Times Cited: 9
Single-cell omics: experimental workflow, data analyses and applications
Fengying Sun, Haoyan Li, Dongqing Sun, et al.
Science China Life Sciences (2024)
Closed Access | Times Cited: 8
Perivascular NOTCH3+ Stem Cells Drive Meningioma Tumorigenesis and Resistance to Radiotherapy
Abrar Choudhury, Martha A. Cady, Calixto‐Hope G. Lucas, et al.
Cancer Discovery (2024) Vol. 14, Iss. 10, pp. 1823-1837
Closed Access | Times Cited: 7
Functional interactions between neurofibromatosis tumor suppressors underlie Schwann cell tumor de-differentiation and treatment resistance
Harish N. Vasudevan, Emily Payne, Cyrille L. Delley, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 6
Deciphering bat influenza H18N11 infection dynamics in male Jamaican fruit bats on a single-cell level
Susanne Kessler, Bradly Burke, Geoffroy Andrieux, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 6
A comprehensive human embryo reference tool using single-cell RNA-sequencing data
Cheng Zhao, Álvaro Plaza Reyes, John P. Schell, et al.
Nature Methods (2024)
Open Access | Times Cited: 6
Single-Cell Lineage Tracing and Clonal State-Fate Analysis
Alejo Rodriguez-Fraticelli, Pedro Sánchez-Sánchez
Methods in molecular biology (2025), pp. 65-84
Closed Access
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