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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Efficient and precise single-cell reference atlas mapping with Symphony
Joyce B. Kang, Aparna Nathan, Kathryn Weinand, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 153

Showing 1-25 of 153 citing articles:

Dictionary learning for integrative, multimodal and scalable single-cell analysis
Yuhan Hao, Tim Stuart, Madeline H. Kowalski, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 2, pp. 293-304
Open Access | Times Cited: 1031
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 436
The specious art of single-cell genomics
Tara Chari, Lior Pachter
PLoS Computational Biology (2023) Vol. 19, Iss. 8, pp. e1011288-e1011288
Open Access | Times Cited: 166
Characterizing cis-regulatory elements using single-cell epigenomics
Sebastian Preißl, Kyle J. Gaulton, Bing Ren
Nature Reviews Genetics (2022) Vol. 24, Iss. 1, pp. 21-43
Closed Access | Times Cited: 133
Cross-tissue, single-cell stromal atlas identifies shared pathological fibroblast phenotypes in four chronic inflammatory diseases
Ilya Korsunsky, Kevin Wei, Mathilde Pohin, et al.
Med (2022) Vol. 3, Iss. 7, pp. 481-518.e14
Open Access | Times Cited: 125
The Specious Art of Single-Cell Genomics
Tara Chari, Lior Pachter
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 119
Human prefrontal cortex gene regulatory dynamics from gestation to adulthood at single-cell resolution
Charles A. Herring, Rebecca K. Simmons, Saskia Freytag, et al.
Cell (2022) Vol. 185, Iss. 23, pp. 4428-4447.e28
Open Access | Times Cited: 115
Platelet-instructed SPP1+ macrophages drive myofibroblast activation in fibrosis in a CXCL4-dependent manner
Konrad Hoeft, Gideon J.L. Schaefer, Hyojin Kim, et al.
Cell Reports (2023) Vol. 42, Iss. 2, pp. 112131-112131
Open Access | Times Cited: 114
Dictionary learning for integrative, multimodal, and scalable single-cell analysis
Yuhan Hao, Tim Stuart, Madeline H. Kowalski, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 106
Human Bone Marrow Organoids for Disease Modeling, Discovery, and Validation of Therapeutic Targets in Hematologic Malignancies
Abdullah O. Khan, Antonio Rodriguez-Romera, Jasmeet S. Reyat, et al.
Cancer Discovery (2022) Vol. 13, Iss. 2, pp. 364-385
Open Access | Times Cited: 79
Detection of cell–cell interactions via photocatalytic cell tagging
Rob Oslund, Tamara Reyes Robles, Cory White, et al.
Nature Chemical Biology (2022) Vol. 18, Iss. 8, pp. 850-858
Open Access | Times Cited: 70
Automatic cell-type harmonization and integration across Human Cell Atlas datasets
Chuan Xu, Martin Prete, Simone Webb, et al.
Cell (2023) Vol. 186, Iss. 26, pp. 5876-5891.e20
Open Access | Times Cited: 55
An immune cell atlas reveals the dynamics of human macrophage specification during prenatal development
Zeshuai Wang, Zhisheng Wu, Hao Wang, et al.
Cell (2023) Vol. 186, Iss. 20, pp. 4454-4471.e19
Open Access | Times Cited: 52
Biologically informed deep learning to query gene programs in single-cell atlases
Mohammad Lotfollahi, Sergei Rybakov, Karin Hrovatin, et al.
Nature Cell Biology (2023)
Open Access | Times Cited: 51
An atlas of cells in the human tonsil
Ramon Massoni-Badosa, Sergio Aguilar-Fernández, Juan C. Nieto, et al.
Immunity (2024) Vol. 57, Iss. 2, pp. 379-399.e18
Open Access | Times Cited: 39
The future of rapid and automated single-cell data analysis using reference mapping
Mohammad Lotfollahi, Yuhan Hao, Fabian J. Theis, et al.
Cell (2024) Vol. 187, Iss. 10, pp. 2343-2358
Open Access | Times Cited: 17
Single-cell and spatial atlases of spinal cord injury in the Tabulae Paralytica
Michael A. Skinnider, Matthieu Gautier, Yue Yang Teo, et al.
Nature (2024) Vol. 631, Iss. 8019, pp. 150-163
Closed Access | Times Cited: 16
Single-cell transcriptome landscape of circulating CD4+ T cell populations in autoimmune diseases
Yoshiaki Yasumizu, Daiki Takeuchi, Reo Morimoto, et al.
Cell Genomics (2024) Vol. 4, Iss. 2, pp. 100473-100473
Open Access | Times Cited: 14
Neoadjuvant PARPi or chemotherapy in ovarian cancer informs targeting effector Treg cells for homologous-recombination-deficient tumors
Yikai Luo, Yu Xia, Dan Liu, et al.
Cell (2024) Vol. 187, Iss. 18, pp. 4905-4925.e24
Open Access | Times Cited: 12
Transitions in lineage specification and gene regulatory networks in hematopoietic stem/progenitor cells over human development
Anindita Roy, Guanlin Wang, Deena Iskander, et al.
Cell Reports (2021) Vol. 36, Iss. 11, pp. 109698-109698
Open Access | Times Cited: 65
Vision, challenges and opportunities for a Plant Cell Atlas
Jahed Ahmed, Oluwafemi Alaba, Gazala Ameen, et al.
eLife (2021) Vol. 10
Open Access | Times Cited: 63
EZH1 repression generates mature iPSC-derived CAR T cells with enhanced antitumor activity
Ran Jing, Irene Scarfo, Mohamad Najia, et al.
Cell stem cell (2022) Vol. 29, Iss. 8, pp. 1181-1196.e6
Open Access | Times Cited: 59
Concordance of MERFISH spatial transcriptomics with bulk and single-cell RNA sequencing
Jonathan Liu, Vanessa Tran, Venkata Naga Pranathi Vemuri, et al.
Life Science Alliance (2022) Vol. 6, Iss. 1, pp. e202201701-e202201701
Open Access | Times Cited: 53
Repertoire analyses reveal T cell antigen receptor sequence features that influence T cell fate
Kaitlyn A. Lagattuta, Joyce B. Kang, Aparna Nathan, et al.
Nature Immunology (2022) Vol. 23, Iss. 3, pp. 446-457
Open Access | Times Cited: 49
TBX20 Improves Contractility and Mitochondrial Function During Direct Human Cardiac Reprogramming
Yawen Tang, Sajesan Aryal, Xiaoxiao Geng, et al.
Circulation (2022) Vol. 146, Iss. 20, pp. 1518-1536
Open Access | Times Cited: 35
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