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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Hinge-shift mechanism as a protein design principle for the evolution of β-lactamases from substrate promiscuity to specificity
Tushar Modi, Valeria A. Risso, Sergio Martínez‐Rodríguez, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 57

Showing 1-25 of 57 citing articles:

Loop dynamics and the evolution of enzyme activity
Marina Corbella, Gaspar Pinto, Shina Caroline Lynn Kamerlin
Nature Reviews Chemistry (2023) Vol. 7, Iss. 8, pp. 536-547
Closed Access | Times Cited: 68
A review on the immobilization of pepsin: A Lys-poor enzyme that is unstable at alkaline pH values
Roberto Morellon‐Sterling, Olga Luisa Tavano, Juan M. Bolívar, et al.
International Journal of Biological Macromolecules (2022) Vol. 210, pp. 682-702
Open Access | Times Cited: 46
Conserved conformational dynamics determine enzyme activity
Kristiane R. Torgeson, Michael W. Clarkson, Daniele Granata, et al.
Science Advances (2022) Vol. 8, Iss. 31
Open Access | Times Cited: 41
Functional, structural properties and interaction mechanism of soy protein isolate nanoparticles modified by high-performance protein-glutaminase
Nan Zheng, Mengfei Long, Zehua Zhang, et al.
Food Hydrocolloids (2023) Vol. 139, pp. 108594-108594
Closed Access | Times Cited: 21
Simultaneous enhancement of multiple functional properties using evolution-informed protein design
Benjamin Fram, Yang Su, Ian Truebridge, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 7
Tailoring industrial enzymes for thermostability and activity evolution by the machine learning-based iCASE strategy
Nan Zheng, Yongchao Cai, Zehua Zhang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Dynamic coupling of residues within proteins as a mechanistic foundation of many enigmatic pathogenic missense variants
Nicholas J. Ose, Brandon M. Butler, Avishek Kumar, et al.
PLoS Computational Biology (2022) Vol. 18, Iss. 4, pp. e1010006-e1010006
Open Access | Times Cited: 27
Penicillin-binding proteins: the master builders and breakers of bacterial cell walls and its interaction with β-lactam antibiotics
Milan Dabhi, R. B. Patel, Vidhi Shah, et al.
Journal of Proteins and Proteomics (2024) Vol. 15, Iss. 2, pp. 215-232
Closed Access | Times Cited: 5
Allosteric regulatory control in dihydrofolate reductase is revealed by dynamic asymmetry
I. Can Kazan, Jeremy H. Mills, S. Banu Ozkan
Protein Science (2023) Vol. 32, Iss. 8
Open Access | Times Cited: 12
The Interplay of Electrostatics and Chemical Positioning in the Evolution of Antibiotic Resistance in TEM β-Lactamases
Samuel H. Schneider, Jacek Kozuch, Steven G. Boxer
ACS Central Science (2021) Vol. 7, Iss. 12, pp. 1996-2008
Open Access | Times Cited: 29
Allosteric Control of Structural Mimicry and Mutational Escape in the SARS-CoV-2 Spike Protein Complexes with the ACE2 Decoys and Miniprotein Inhibitors: A Network-Based Approach for Mutational Profiling of Binding and Signaling
Gennady M. Verkhivker, Steve Agajanian, Deniz Yaşar Öztaş, et al.
Journal of Chemical Information and Modeling (2021) Vol. 61, Iss. 10, pp. 5172-5191
Open Access | Times Cited: 28
Dynamic allostery highlights the evolutionary differences between the CoV-1 and CoV-2 main proteases
Paul Campitelli, Lu Jin, S. Banu Ozkan
Biophysical Journal (2022) Vol. 121, Iss. 8, pp. 1483-1492
Open Access | Times Cited: 15
Directed reconstruction of a novel ancestral alcohol dehydrogenase featuring shifted pH-profile, enhanced thermostability and expanded substrate spectrum
Xiaoyu Chen, Zhe Dou, Tianwei Luo, et al.
Bioresource Technology (2022) Vol. 363, pp. 127886-127886
Closed Access | Times Cited: 15
Investigating the allosteric response of the PICK1 PDZ domain to different ligands with all‐atom simulations
Amy O. Stevens, I. Can Kazan, Banu Özkan, et al.
Protein Science (2022) Vol. 31, Iss. 12
Open Access | Times Cited: 15
β-Lactams from the Ocean
Jed F. Fisher, Shahriar Mobashery
Marine Drugs (2023) Vol. 21, Iss. 2, pp. 86-86
Open Access | Times Cited: 9
Some mechanistic underpinnings of molecular adaptations of SARS-COV-2 spike protein by integrating candidate adaptive polymorphisms with protein dynamics
Nicholas J. Ose, Paul Campitelli, Tushar Modi, et al.
eLife (2024) Vol. 12
Open Access | Times Cited: 2
The Statistical Trends of Protein Evolution: A Lesson from AlphaFold Database
Qian-Yuan Tang, Weitong Ren, Jun Wang, et al.
Molecular Biology and Evolution (2022) Vol. 39, Iss. 10
Open Access | Times Cited: 13
Second-Shell Residues Contribute to Catalysis by Predominately Preorganizing the Apo State in PafA
Jiahua Deng, Qiang Cui
Journal of the American Chemical Society (2023) Vol. 145, Iss. 20, pp. 11333-11347
Closed Access | Times Cited: 7
Design of novel cyanovirin-N variants by modulation of binding dynamics through distal mutations
I. Can Kazan, Prerna Sharma, Mohammad Imtiazur Rahman, et al.
eLife (2022) Vol. 11
Open Access | Times Cited: 12
Protein dynamics provide mechanistic insights about epistasis among common missense polymorphisms
Nicholas J. Ose, Paul Campitelli, Ravi Patel, et al.
Biophysical Journal (2023) Vol. 122, Iss. 14, pp. 2938-2947
Open Access | Times Cited: 6
Simultaneous enhancement of multiple functional properties using evolution-informed protein design
Benjamin Fram, Ian Truebridge, Yang Su, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 6
DHFR Mutants Modulate Their Synchronized Dynamics with the Substrate by Shifting Hydrogen Bond Occupancies
Ebru Çetin, Ali Rana Atılgan, Canan Atılgan
Journal of Chemical Information and Modeling (2022) Vol. 62, Iss. 24, pp. 6715-6726
Open Access | Times Cited: 10
General Theory of Specific Binding: Insights from a Genetic-Mechano-Chemical Protein Model
J. Michael McBride, Jean-Pierre Eckmann, Tsvi Tlusty
Molecular Biology and Evolution (2022) Vol. 39, Iss. 11
Open Access | Times Cited: 10
Friends and relatives: insight into conformational regulation from orthologues and evolutionary lineages using KIF and KIN
Dariia Yehorova, Rory Crean, Peter M. Kasson, et al.
Faraday Discussions (2024) Vol. 252, pp. 341-353
Open Access | Times Cited: 1
Evidence that the cold- and menthol-sensing functions of the human TRPM8 channel evolved separately
Dustin D. Luu, Nikhil Ramesh, I. Can Kazan, et al.
Science Advances (2024) Vol. 10, Iss. 25
Open Access | Times Cited: 1
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