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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Comprehensive analysis of single cell ATAC-seq data with SnapATAC
Rongxin Fang, Sebastian Preißl, Yang Li, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 335

Showing 1-25 of 335 citing articles:

Single-cell chromatin state analysis with Signac
Tim Stuart, Avi Srivastava, Shaista Madad, et al.
Nature Methods (2021) Vol. 18, Iss. 11, pp. 1333-1341
Open Access | Times Cited: 976
A multimodal cell census and atlas of the mammalian primary motor cortex
Edward M. Callaway, Hong‐Wei Dong, Joseph R. Ecker, et al.
Nature (2021) Vol. 598, Iss. 7879, pp. 86-102
Open Access | Times Cited: 438
Best practices for single-cell analysis across modalities
Lukas Heumos, Anna C. Schaar, Christopher Lance, et al.
Nature Reviews Genetics (2023) Vol. 24, Iss. 8, pp. 550-572
Open Access | Times Cited: 427
A single-cell atlas of chromatin accessibility in the human genome
Kai Zhang, James D. Hocker, Michael Miller, et al.
Cell (2021) Vol. 184, Iss. 24, pp. 5985-6001.e19
Open Access | Times Cited: 305
An atlas of healthy and injured cell states and niches in the human kidney
Blue B. Lake, Rajasree Menon, Seth Winfree, et al.
Nature (2023) Vol. 619, Iss. 7970, pp. 585-594
Open Access | Times Cited: 302
A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex
Zizhen Yao, Hanqing Liu, Fangming Xie, et al.
Nature (2021) Vol. 598, Iss. 7879, pp. 103-110
Open Access | Times Cited: 246
Integrative Single-Cell RNA-Seq and ATAC-Seq Analysis of Human Developmental Hematopoiesis
Anna Maria Ranzoni, Andrea Tangherloni, Ivan Berest, et al.
Cell stem cell (2020) Vol. 28, Iss. 3, pp. 472-487.e7
Open Access | Times Cited: 242
Single-cell epigenomics reveals mechanisms of human cortical development
Ryan Ziffra, Chang N. Kim, Jayden M. Ross, et al.
Nature (2021) Vol. 598, Iss. 7879, pp. 205-213
Open Access | Times Cited: 212
The single-cell epigenomic and transcriptional landscape of immunity to influenza vaccination
Florian Wimmers, Michele Donato, Alex Kuo, et al.
Cell (2021) Vol. 184, Iss. 15, pp. 3915-3935.e21
Open Access | Times Cited: 198
Single-cell multiomic profiling of human lungs reveals cell-type-specific and age-dynamic control of SARS-CoV2 host genes
Allen Wang, Joshua Chiou, Olivier Poirion, et al.
eLife (2020) Vol. 9
Open Access | Times Cited: 163
A single-cell atlas of glioblastoma evolution under therapy reveals cell-intrinsic and cell-extrinsic therapeutic targets
Lin Wang, Jangham Jung, Husam Babikir, et al.
Nature Cancer (2022) Vol. 3, Iss. 12, pp. 1534-1552
Open Access | Times Cited: 145
Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex
John K. Mich, Lucas T. Graybuck, Erik E. Hess, et al.
Cell Reports (2021) Vol. 34, Iss. 13, pp. 108754-108754
Open Access | Times Cited: 141
Multi-omics integration in the age of million single-cell data
Zhen Miao, Benjamin D. Humphreys, Andrew P. McMahon, et al.
Nature Reviews Nephrology (2021) Vol. 17, Iss. 11, pp. 710-724
Open Access | Times Cited: 140
An atlas of gene regulatory elements in adult mouse cerebrum
Yang Eric Li, Sebastian Preißl, Xiaomeng Hou, et al.
Nature (2021) Vol. 598, Iss. 7879, pp. 129-136
Open Access | Times Cited: 135
Characterizing cis-regulatory elements using single-cell epigenomics
Sebastian Preißl, Kyle J. Gaulton, Bing Ren
Nature Reviews Genetics (2022) Vol. 24, Iss. 1, pp. 21-43
Closed Access | Times Cited: 133
Epigenomic and transcriptomic analyses define core cell types, genes and targetable mechanisms for kidney disease
Hongbo Liu, Tomohito Doke, Dong Guo, et al.
Nature Genetics (2022) Vol. 54, Iss. 7, pp. 950-962
Closed Access | Times Cited: 128
Thymic epithelial cells co-opt lineage-defining transcription factors to eliminate autoreactive T cells
Daniel A. Michelson, Koji Hase, Tsuneyasu Kaisho, et al.
Cell (2022) Vol. 185, Iss. 14, pp. 2542-2558.e18
Open Access | Times Cited: 123
Mapping the genetic architecture of human traits to cell types in the kidney identifies mechanisms of disease and potential treatments
Xin Sheng, Yuting Guan, Ziyuan Ma, et al.
Nature Genetics (2021) Vol. 53, Iss. 9, pp. 1322-1333
Open Access | Times Cited: 119
Modeling gene regulatory networks using neural network architectures
Hantao Shu, Jingtian Zhou, Qiuyu Lian, et al.
Nature Computational Science (2021) Vol. 1, Iss. 7, pp. 491-501
Closed Access | Times Cited: 107
A genetic map of the mouse dorsal vagal complex and its role in obesity
Mette Q. Ludwig, Wenwen Cheng, Desiree Gordian, et al.
Nature Metabolism (2021) Vol. 3, Iss. 4, pp. 530-545
Closed Access | Times Cited: 105
Single nucleus multi-omics identifies human cortical cell regulatory genome diversity
Chongyuan Luo, Hanqing Liu, Fangming Xie, et al.
Cell Genomics (2022) Vol. 2, Iss. 3, pp. 100107-100107
Open Access | Times Cited: 105
Targeting histone acetylation dynamics and oncogenic transcription by catalytic P300/CBP inhibition
Simon J. Hogg, Olga Motorna, Leonie A. Cluse, et al.
Molecular Cell (2021) Vol. 81, Iss. 10, pp. 2183-2200.e13
Open Access | Times Cited: 99
Single-cell nuclear architecture across cell types in the mouse brain
Yodai Takei, Shiwei Zheng, Jina Yun, et al.
Science (2021) Vol. 374, Iss. 6567, pp. 586-594
Open Access | Times Cited: 99
Spatially resolved epigenomic profiling of single cells in complex tissues
Tian Lu, Cheen Euong Ang, Xiaowei Zhuang
Cell (2022) Vol. 185, Iss. 23, pp. 4448-4464.e17
Open Access | Times Cited: 99
Multimodal single cell sequencing implicates chromatin accessibility and genetic background in diabetic kidney disease progression
Parker C. Wilson, Yoshiharu Muto, Hao Wu, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 97
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