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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Establishment of a morphological atlas of the Caenorhabditis elegans embryo using deep-learning-based 4D segmentation
Jianfeng Cao, Guoye Guan, Vincy Wing Sze Ho, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 71

Showing 1-25 of 71 citing articles:

Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning
Noah F. Greenwald, Geneva Miller, Erick Moen, et al.
Nature Biotechnology (2021) Vol. 40, Iss. 4, pp. 555-565
Open Access | Times Cited: 598
Deep learning-based aberration compensation improves contrast and resolution in fluorescence microscopy
Min Guo, Yicong Wu, Chad M. Hobson, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 3
Whole-cell segmentation of tissue images with human-level performance using large-scale data annotation and deep learning
Noah F. Greenwald, Geneva Miller, Erick Moen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 70
Embryo mechanics cartography: inference of 3D force atlases from fluorescence microscopy
Sacha Ichbiah, Fabrice Delbary, Alex McDougall, et al.
Nature Methods (2023) Vol. 20, Iss. 12, pp. 1989-1999
Open Access | Times Cited: 31
Apico-basal Intercalations Enable the Integrity of Curved Epithelia
Samira Anbari, Pedro Gómez‐Gálvez, Pablo Vicente‐Munuera, et al.
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 1204-1214
Open Access | Times Cited: 1
Deep learning for bioimage analysis in developmental biology
Adrien Hallou, Hannah Yevick, Bianca Dumitrascu, et al.
Development (2021) Vol. 148, Iss. 18
Open Access | Times Cited: 51
Caenorhabditis elegans as a powerful tool in natural product bioactivity research
Ngoc Minh Ha, Son Hung Tran, Yhong‐Hee Shim, et al.
Applied Biological Chemistry (2022) Vol. 65, Iss. 1
Open Access | Times Cited: 38
EmbedSeg: Embedding-based Instance Segmentation for Biomedical Microscopy Data
Manan Lalit, Pavel Tomančák, Florian Jug
Medical Image Analysis (2022) Vol. 81, pp. 102523-102523
Closed Access | Times Cited: 36
Applications and Advances of Multicellular Tumor Spheroids: Challenges in Their Development and Analysis
Achilleas Mitrakas, Avgi Tsolou, Stylianos Didaskalou, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 8, pp. 6949-6949
Open Access | Times Cited: 22
A Foundation Model for Cell Segmentation
Uriah Israel, Markus Marks, Rohit Dilip, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 19
Automated reconstruction of whole-embryo cell lineages by learning from sparse annotations
Caroline Malin-Mayor, P. B. Hirsch, Léo Guignard, et al.
Nature Biotechnology (2022) Vol. 41, Iss. 1, pp. 44-49
Open Access | Times Cited: 26
Computable early Caenorhabditis elegans embryo with a phase field model
Xiangyu Kuang, Guoye Guan, Ming‐Kin Wong, et al.
PLoS Computational Biology (2022) Vol. 18, Iss. 1, pp. e1009755-e1009755
Open Access | Times Cited: 20
MorphoSim: an efficient and scalable phase-field framework for accurately simulating multicellular morphologies
Xiangyu Kuang, Guoye Guan, Chao Tang, et al.
npj Systems Biology and Applications (2023) Vol. 9, Iss. 1
Open Access | Times Cited: 12
Topological packing statistics of living and nonliving matter
Dominic J. Skinner, Hannah Jeckel, Adam C. Martin, et al.
Science Advances (2023) Vol. 9, Iss. 36
Open Access | Times Cited: 11
Mechanics and self-organization in tissue development
Pedro Gómez‐Gálvez, Samira Anbari, Luis M. Escudero, et al.
Seminars in Cell and Developmental Biology (2021) Vol. 120, pp. 147-159
Open Access | Times Cited: 24
Deep Learning in Cell Image Analysis
Junde Xu, Donghao Zhou, Danruo Deng, et al.
Intelligent Computing (2022) Vol. 2022
Open Access | Times Cited: 18
Cell lineage-resolved embryonic morphological map reveals signaling associated with cell fate and size asymmetry
Guoye Guan, Zelin Li, Yiming Ma, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Role of Nod factor receptors and its allies involved in nitrogen fixation
Jawahar Singh, Praveen Kumar Verma
Planta (2023) Vol. 257, Iss. 3
Closed Access | Times Cited: 9
spheresDT/Mpacts-PiCS: cell tracking and shape retrieval in membrane-labeled embryos
Wim Thiels, Bart Smeets, Maxim Cuvelier, et al.
Bioinformatics (2021) Vol. 37, Iss. 24, pp. 4851-4856
Open Access | Times Cited: 17
A quantitative biophysical principle to explain the 3D cellular connectivity in curved epithelia
Pedro Gómez‐Gálvez, Pablo Vicente‐Munuera, Samira Anbari, et al.
Cell Systems (2022) Vol. 13, Iss. 8, pp. 631-643.e8
Open Access | Times Cited: 12
A general algorithm for consensus 3D cell segmentation from 2D segmented stacks
Felix Zhou, Clarence Yapp, Zhiguo Shang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
CShaperApp: Segmenting and analyzing cellular morphologies of the developing Caenorhabditis elegans embryo
Jianfeng Cao, Lihan Hu, Guoye Guan, et al.
Quantitative Biology (2024) Vol. 12, Iss. 3, pp. 329-334
Open Access | Times Cited: 2
Characterizing Cellular Physiological States with Three-Dimensional Shape Descriptors for Cell Membranes
Guoye Guan, Yixuan Chen, Hongli Wang, et al.
Membranes (2024) Vol. 14, Iss. 6, pp. 137-137
Open Access | Times Cited: 2
The Molecular Basis of Differentiation Wave Activity in Embryogenesis Bradly Alicea
Bradly Alicea, Suroush Bastani, Natalie K. Gordon, et al.
Biosystems (2024) Vol. 243, pp. 105272-105272
Closed Access | Times Cited: 2
Advancing insights into microgravity induced muscle changes using Caenorhabditis elegans as a model organism
Laura Beckett, Philip M. Williams, Li Shean Toh, et al.
npj Microgravity (2024) Vol. 10, Iss. 1
Open Access | Times Cited: 2
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