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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Accurate estimation of cell composition in bulk expression through robust integration of single-cell information
Brandon Jew, Marcus Alvarez, Elior Rahmani, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 315

Showing 1-25 of 315 citing articles:

Single cell transcriptional and chromatin accessibility profiling redefine cellular heterogeneity in the adult human kidney
Yoshiharu Muto, Parker C. Wilson, Nicolas Ledru, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 331
Benchmarking of cell type deconvolution pipelines for transcriptomics data
Francisco Avila Cobos, José Alquicira-Hernández, Joseph E. Powell, et al.
Nature Communications (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 323
Cell type and gene expression deconvolution with BayesPrism enables Bayesian integrative analysis across bulk and single-cell RNA sequencing in oncology
Tinyi Chu, Zhong Wang, Dana Pe’er, et al.
Nature Cancer (2022) Vol. 3, Iss. 4, pp. 505-517
Open Access | Times Cited: 280
Spatially informed cell-type deconvolution for spatial transcriptomics
Ying Ma, Xiang Zhou
Nature Biotechnology (2022) Vol. 40, Iss. 9, pp. 1349-1359
Open Access | Times Cited: 277
SCDC: bulk gene expression deconvolution by multiple single-cell RNA sequencing references
Meichen Dong, Aatish Thennavan, Eugene Urrutia, et al.
Briefings in Bioinformatics (2019) Vol. 22, Iss. 1, pp. 416-427
Open Access | Times Cited: 203
Mapping the single-cell transcriptomic response of murine diabetic kidney disease to therapies
Hao Wu, Romer Gonzalez Villalobos, Xiang Yao, et al.
Cell Metabolism (2022) Vol. 34, Iss. 7, pp. 1064-1078.e6
Open Access | Times Cited: 147
Single-cell transcriptomic analysis of the tumor ecosystems underlying initiation and progression of papillary thyroid carcinoma
Weilin Pu, Xiao Shi, Pengcheng Yu, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 140
Mapping the genetic architecture of human traits to cell types in the kidney identifies mechanisms of disease and potential treatments
Xin Sheng, Yuting Guan, Ziyuan Ma, et al.
Nature Genetics (2021) Vol. 53, Iss. 9, pp. 1322-1333
Open Access | Times Cited: 126
Single-cell analysis highlights differences in druggable pathways underlying adaptive or fibrotic kidney regeneration
Michael S. Balzer, Tomohito Doke, Ya‐Wen Yang, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 121
A single-cell analysis of breast cancer cell lines to study tumour heterogeneity and drug response
Gennaro Gambardella, Gaetano Viscido, Barbara Tumaini, et al.
Nature Communications (2022) Vol. 13, Iss. 1
Open Access | Times Cited: 119
Neuropathic pain caused by miswiring and abnormal end organ targeting
Vijayan Gangadharan, Hongwei Zheng, Francisco J. Taberner, et al.
Nature (2022) Vol. 606, Iss. 7912, pp. 137-145
Open Access | Times Cited: 99
Precise reconstruction of the TME using bulk RNA-seq and a machine learning algorithm trained on artificial transcriptomes
Aleksandr Zaitsev, Maksim Chelushkin, Daniiar Dyikanov, et al.
Cancer Cell (2022) Vol. 40, Iss. 8, pp. 879-894.e16
Open Access | Times Cited: 86
An integrated single cell and spatial transcriptomic map of human white adipose tissue
Lucas Massier, Jutta Jalkanen, Merve Elmastas, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 83
Inflammatory responses in the placenta upon SARS-CoV-2 infection late in pregnancy
Lissenya B. Argueta, Lauretta A. Lacko, Yaron Bram, et al.
iScience (2022) Vol. 25, Iss. 5, pp. 104223-104223
Open Access | Times Cited: 78
Detecting signatures of selection on gene expression
Peter D. Price, Daniela H. Palmer Droguett, Jessica A. Taylor, et al.
Nature Ecology & Evolution (2022) Vol. 6, Iss. 7, pp. 1035-1045
Closed Access | Times Cited: 73
Identification of hypoxic macrophages in glioblastoma with therapeutic potential for vasculature normalization
Wenying Wang, Tianran Li, Yue Cheng, et al.
Cancer Cell (2024) Vol. 42, Iss. 5, pp. 815-832.e12
Open Access | Times Cited: 47
scMD facilitates cell type deconvolution using single-cell DNA methylation references
Manqi Cai, Jingtian Zhou, Chris McKennan, et al.
Communications Biology (2024) Vol. 7, Iss. 1
Open Access | Times Cited: 39
Single-cell genomics and regulatory networks for 388 human brains
Prashant S. Emani, Jason Liu, Declan Clarke, et al.
Science (2024) Vol. 384, Iss. 6698
Open Access | Times Cited: 39
Exploring cellular diversity in lung adenocarcinoma epithelium: Advancing prognostic methods and immunotherapeutic strategies
Lianmin Zhang, Yanan Cui, Jie Mei, et al.
Cell Proliferation (2024) Vol. 57, Iss. 11
Open Access | Times Cited: 26
Systems biology dissection of PTSD and MDD across brain regions, cell types, and blood
Nikolaos P. Daskalakis, Artemis Iatrou, Chris Chatzinakos, et al.
Science (2024) Vol. 384, Iss. 6698
Closed Access | Times Cited: 22
A single cell atlas of frozen shoulder capsule identifies features associated with inflammatory fibrosis resolution
Michael Ng, Rowie Borst, Hamez Gacaferi, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 16
A comprehensive single-cell breast tumor atlas defines epithelial and immune heterogeneity and interactions predicting anti-PD-1 therapy response
Lily Xu, Kaitlyn Saunders, Shao-Po Huang, et al.
Cell Reports Medicine (2024) Vol. 5, Iss. 5, pp. 101511-101511
Open Access | Times Cited: 16
A human-specific, concerted repression of microcephaly genes contributes to radiation-induced growth defects in cortical organoids
Jéssica Honorato Ribeiro, Emre Etlioglu, Jasmine Buset, et al.
iScience (2025) Vol. 28, Iss. 2, pp. 111853-111853
Open Access | Times Cited: 2
Combinatorial Transcriptional Profiling of Mouse and Human Enteric Neurons Identifies Shared and Disparate Subtypes In Situ
Aaron A. May‐Zhang, Eric Tycksen, Austin N. Southard-Smith, et al.
Gastroenterology (2020) Vol. 160, Iss. 3, pp. 755-770.e26
Open Access | Times Cited: 99
Cross-species RNA-seq for deciphering host–microbe interactions
Alexander J. Westermann, Jörg Vogel
Nature Reviews Genetics (2021) Vol. 22, Iss. 6, pp. 361-378
Open Access | Times Cited: 87
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