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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Multiplexed droplet single-cell RNA-sequencing using natural genetic variation
Hyun Min Kang, Meena Subramaniam, Sasha Targ, et al.
Nature Biotechnology (2017) Vol. 36, Iss. 1, pp. 89-94
Open Access | Times Cited: 959

Showing 1-25 of 959 citing articles:

Integrating single-cell transcriptomic data across different conditions, technologies, and species
Andrew Butler, Paul Hoffman, Peter Smibert, et al.
Nature Biotechnology (2018) Vol. 36, Iss. 5, pp. 411-420
Open Access | Times Cited: 10774
Reference-based analysis of lung single-cell sequencing reveals a transitional profibrotic macrophage
Dvir Aran, Agnieszka Looney, Leqian Liu, et al.
Nature Immunology (2019) Vol. 20, Iss. 2, pp. 163-172
Open Access | Times Cited: 3220
DoubletFinder: Doublet Detection in Single-Cell RNA Sequencing Data Using Artificial Nearest Neighbors
Christopher S. McGinnis, Lyndsay M. Murrow, Zev J. Gartner
Cell Systems (2019) Vol. 8, Iss. 4, pp. 329-337.e4
Open Access | Times Cited: 2543
Single-cell reconstruction of the early maternal–fetal interface in humans
Roser Vento‐Tormo, Mirjana Efremova, Rachel A. Botting, et al.
Nature (2018) Vol. 563, Iss. 7731, pp. 347-353
Open Access | Times Cited: 1794
Scrublet: Computational Identification of Cell Doublets in Single-Cell Transcriptomic Data
Samuel L. Wolock, Romain Lopez, Allon M. Klein
Cell Systems (2019) Vol. 8, Iss. 4, pp. 281-291.e9
Open Access | Times Cited: 1744
Current best practices in single‐cell RNA‐seq analysis: a tutorial
Malte D. Luecken, Fabian J. Theis
Molecular Systems Biology (2019) Vol. 15, Iss. 6
Open Access | Times Cited: 1658
A single-cell atlas of the peripheral immune response in patients with severe COVID-19
Aaron J. Wilk, Arjun Rustagi, Nancy Q. Zhao, et al.
Nature Medicine (2020) Vol. 26, Iss. 7, pp. 1070-1076
Open Access | Times Cited: 1481
Integrative single-cell analysis
Tim Stuart, Rahul Satija
Nature Reviews Genetics (2019) Vol. 20, Iss. 5, pp. 257-272
Closed Access | Times Cited: 1106
Eleven grand challenges in single-cell data science
David Lähnemann, Johannes Köster, Ewa Szczurek, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 990
ArchR is a scalable software package for integrative single-cell chromatin accessibility analysis
Jeffrey M. Granja, M. Ryan Corces, Sarah E. Pierce, et al.
Nature Genetics (2021) Vol. 53, Iss. 3, pp. 403-411
Open Access | Times Cited: 907
Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics
Marlon Stoeckius, Shiwei Zheng, Brian Houck‐Loomis, et al.
Genome biology (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 861
Efficient integration of heterogeneous single-cell transcriptomes using Scanorama
Brian Hie, Bryan D. Bryson, Bonnie Berger
Nature Biotechnology (2019) Vol. 37, Iss. 6, pp. 685-691
Open Access | Times Cited: 738
Transcriptome-scale spatial gene expression in the human dorsolateral prefrontal cortex
Kristen R. Maynard, Leonardo Collado‐Torres, Lukas M. Weber, et al.
Nature Neuroscience (2021) Vol. 24, Iss. 3, pp. 425-436
Open Access | Times Cited: 710
scMC learns biological variation through the alignment of multiple single-cell genomics datasets
Lihua Zhang, Qing Nie
Genome biology (2021) Vol. 22, Iss. 1
Open Access | Times Cited: 643
Organoid single-cell genomic atlas uncovers human-specific features of brain development
Sabina Kanton, Michael James Boyle, Zhisong He, et al.
Nature (2019) Vol. 574, Iss. 7778, pp. 418-422
Open Access | Times Cited: 618
Confronting false discoveries in single-cell differential expression
Jordan W. Squair, Matthieu Gautier, Claudia Kathe, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 564
MULTI-seq: sample multiplexing for single-cell RNA sequencing using lipid-tagged indices
Christopher S. McGinnis, David M. Patterson, Juliane Winkler, et al.
Nature Methods (2019) Vol. 16, Iss. 7, pp. 619-626
Open Access | Times Cited: 552
A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors
Michal Slyper, Caroline Porter, Orr Ashenberg, et al.
Nature Medicine (2020) Vol. 26, Iss. 5, pp. 792-802
Open Access | Times Cited: 545
De novo assembly, annotation, and comparative analysis of 26 diverse maize genomes
Matthew B. Hufford, Arun S. Seetharam, Margaret Woodhouse, et al.
Science (2021) Vol. 373, Iss. 6555, pp. 655-662
Open Access | Times Cited: 447
The Human Tumor Atlas Network: Charting Tumor Transitions across Space and Time at Single-Cell Resolution
Orit Rozenblatt–Rosen, Aviv Regev, Philipp Oberdoerffer, et al.
Cell (2020) Vol. 181, Iss. 2, pp. 236-249
Open Access | Times Cited: 435
Lineage Tracing in Humans Enabled by Mitochondrial Mutations and Single-Cell Genomics
Leif S. Ludwig, Caleb A. Lareau, Jacob C. Ulirsch, et al.
Cell (2019) Vol. 176, Iss. 6, pp. 1325-1339.e22
Open Access | Times Cited: 431
GSEApy: a comprehensive package for performing gene set enrichment analysis in Python
Zhuoqing Fang, Xinyuan Liu, Gary Peltz
Bioinformatics (2022) Vol. 39, Iss. 1
Open Access | Times Cited: 427
scGen predicts single-cell perturbation responses
Mohammad Lotfollahi, F. Alexander Wolf, Fabian J. Theis
Nature Methods (2019) Vol. 16, Iss. 8, pp. 715-721
Closed Access | Times Cited: 415
Doublet identification in single-cell sequencing data using scDblFinder
Pierre‐Luc Germain, Aaron T. L. Lun, Will Macnair, et al.
F1000Research (2021) Vol. 10, pp. 979-979
Closed Access | Times Cited: 402
Benchmarking single-cell RNA-sequencing protocols for cell atlas projects
Elisabetta Mereu, Atefeh Lafzi, Cátia Moutinho, et al.
Nature Biotechnology (2020) Vol. 38, Iss. 6, pp. 747-755
Open Access | Times Cited: 401
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