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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Comprehensive transcriptome analysis using synthetic long-read sequencing reveals molecular co-association of distant splicing events
Hagen Tilgner, Fereshteh Jahanbani, Tim Blauwkamp, et al.
Nature Biotechnology (2015) Vol. 33, Iss. 7, pp. 736-742
Open Access | Times Cited: 202

Showing 1-25 of 202 citing articles:

GENCODE reference annotation for the human and mouse genomes
Adam Frankish, Mark Diekhans, Anne-Maud Ferreira, et al.
Nucleic Acids Research (2018) Vol. 47, Iss. D1, pp. D766-D773
Open Access | Times Cited: 2758
A survey of best practices for RNA-seq data analysis
Ana Conesa, Pedro Madrigal, Sonia Tarazona, et al.
Genome biology (2016) Vol. 17, Iss. 1
Open Access | Times Cited: 2421
Opportunities and challenges in long-read sequencing data analysis
Shanika L. Amarasinghe, Shian Su, Xueyi Dong, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 2009
High-Throughput Sequencing Technologies
Jason Reuter, Damek V. Spacek, M Snyder
Molecular Cell (2015) Vol. 58, Iss. 4, pp. 586-597
Open Access | Times Cited: 1226
The Third Revolution in Sequencing Technology
Erwin L. van Dijk, Yan Jaszczyszyn, Delphine Naquin, et al.
Trends in Genetics (2018) Vol. 34, Iss. 9, pp. 666-681
Closed Access | Times Cited: 947
RNA‐Seq methods for transcriptome analysis
Radmila Hrdličková, Masoud Toloue, Bin Tian
Wiley Interdisciplinary Reviews - RNA (2016) Vol. 8, Iss. 1
Open Access | Times Cited: 555
Widespread Expansion of Protein Interaction Capabilities by Alternative Splicing
Xinping Yang, Jasmin Coulombe‐Huntington, Shuli Kang, et al.
Cell (2016) Vol. 164, Iss. 4, pp. 805-817
Open Access | Times Cited: 527
Piercing the dark matter: bioinformatics of long-range sequencing and mapping
Fritz J. Sedlazeck, Hayan Lee, Charlotte A. Darby, et al.
Nature Reviews Genetics (2018) Vol. 19, Iss. 6, pp. 329-346
Closed Access | Times Cited: 493
Aberrant RNA splicing in cancer; expression changes and driver mutations of splicing factor genes
Anita Sveen, Sami Kilpinen, Anja Ruusulehto, et al.
Oncogene (2015) Vol. 35, Iss. 19, pp. 2413-2427
Open Access | Times Cited: 441
SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification
Manuel Tardáguila, Lorena de la Fuente, Cristina Martí, et al.
Genome Research (2018) Vol. 28, Iss. 3, pp. 396-411
Open Access | Times Cited: 394
Nanopore long-read RNAseq reveals widespread transcriptional variation among the surface receptors of individual B cells
Ashley Byrne, Anna E. Beaudin, Hugh E. Olsen, et al.
Nature Communications (2017) Vol. 8, Iss. 1
Open Access | Times Cited: 362
Splicing and transcription touch base: co-transcriptional spliceosome assembly and function
Lydia Herzel, Diana S. M. Ottoz, Tara Alpert, et al.
Nature Reviews Molecular Cell Biology (2017) Vol. 18, Iss. 10, pp. 637-650
Open Access | Times Cited: 329
The Expanding Landscape of Alternative Splicing Variation in Human Populations
Eddie Park, Zhicheng Pan, Zijun Zhang, et al.
The American Journal of Human Genetics (2018) Vol. 102, Iss. 1, pp. 11-26
Open Access | Times Cited: 317
Single-cell isoform RNA sequencing characterizes isoforms in thousands of cerebellar cells
Ishaan Gupta, Paul Collier, Bettina Haase, et al.
Nature Biotechnology (2018) Vol. 36, Iss. 12, pp. 1197-1202
Open Access | Times Cited: 316
Gaining comprehensive biological insight into the transcriptome by performing a broad-spectrum RNA-seq analysis
Sayed Mohammad Ebrahim Sahraeian, Marghoob Mohiyuddin, Robert Sebra, et al.
Nature Communications (2017) Vol. 8, Iss. 1
Open Access | Times Cited: 286
Comparative transcriptomics in human and mouse
Alessandra Breschi, T Gingeras, Roderic Guigó
Nature Reviews Genetics (2017) Vol. 18, Iss. 7, pp. 425-440
Open Access | Times Cited: 250
Improving nanopore read accuracy with the R2C2 method enables the sequencing of highly multiplexed full-length single-cell cDNA
Roger Volden, Theron Palmer, Ashley Byrne, et al.
Proceedings of the National Academy of Sciences (2018) Vol. 115, Iss. 39, pp. 9726-9731
Open Access | Times Cited: 218
The Dimensions, Dynamics, and Relevance of the Mammalian Noncoding Transcriptome
Ira W. Deveson, Simon A. Hardwick, Tim R. Mercer, et al.
Trends in Genetics (2017) Vol. 33, Iss. 7, pp. 464-478
Closed Access | Times Cited: 192
TACO produces robust multisample transcriptome assemblies from RNA-seq
Yashar S. Niknafs, Balaji Pandian, Hariharan Iyer, et al.
Nature Methods (2016) Vol. 14, Iss. 1, pp. 68-70
Open Access | Times Cited: 190
Transcriptome variation in human tissues revealed by long-read sequencing
Dafni A. Glinos, Garrett Garborcauskas, Paul Hoffman, et al.
Nature (2022) Vol. 608, Iss. 7922, pp. 353-359
Open Access | Times Cited: 190
A spatially resolved brain region- and cell type-specific isoform atlas of the postnatal mouse brain
Anoushka Joglekar, Andrey D. Prjibelski, Ahmed Mahfouz, et al.
Nature Communications (2021) Vol. 12, Iss. 1
Open Access | Times Cited: 184
Analysis of Transcriptome and Epitranscriptome in Plants Using PacBio Iso-Seq and Nanopore-Based Direct RNA Sequencing
Liangzhen Zhao, Hangxiao Zhang, Markus V. Kohnen, et al.
Frontiers in Genetics (2019) Vol. 10
Open Access | Times Cited: 151
Single-nuclei isoform RNA sequencing unlocks barcoded exon connectivity in frozen brain tissue
Simon A. Hardwick, Wen Hu, Anoushka Joglekar, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 7, pp. 1082-1092
Open Access | Times Cited: 85
Single-cell long-read sequencing-based mapping reveals specialized splicing patterns in developing and adult mouse and human brain
Anoushka Joglekar, Wen Hu, Bei Zhang, et al.
Nature Neuroscience (2024) Vol. 27, Iss. 6, pp. 1051-1063
Open Access | Times Cited: 27
Functional Annotation of Animal Genomes (FAANG): Current Achievements and Roadmap
Elisabetta Giuffra, Christopher K. Tuggle, Alan Archibald, et al.
Annual Review of Animal Biosciences (2018) Vol. 7, Iss. 1, pp. 65-88
Closed Access | Times Cited: 158
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