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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

A communal catalogue reveals Earth’s multiscale microbial diversity
Luke Thompson, Jon G. Sanders, Daniel McDonald, et al.
Nature (2017) Vol. 551, Iss. 7681, pp. 457-463
Open Access | Times Cited: 2298

Showing 1-25 of 2298 citing articles:

Optimizing taxonomic classification of marker-gene amplicon sequences with QIIME 2’s q2-feature-classifier plugin
Nicholas A. Bokulich, Benjamin D. Kaehler, Jai Ram Rideout, et al.
Microbiome (2018) Vol. 6, Iss. 1
Open Access | Times Cited: 4325
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy
Jan P. Meier‐Kolthoff, Markus Göker
Nature Communications (2019) Vol. 10, Iss. 1
Open Access | Times Cited: 2262
Multi-omics of the gut microbial ecosystem in inflammatory bowel diseases
Jason Lloyd‐Price, Cesar Arze, Ashwin N. Ananthakrishnan, et al.
Nature (2019) Vol. 569, Iss. 7758, pp. 655-662
Open Access | Times Cited: 2183
A global atlas of the dominant bacteria found in soil
Manuel Delgado‐Baquerizo, Angela Oliverio, Tess E. Brewer, et al.
Science (2018) Vol. 359, Iss. 6373, pp. 320-325
Open Access | Times Cited: 1814
Best practices for analysing microbiomes
Rob Knight, Alison Vrbanac, Bryn C. Taylor, et al.
Nature Reviews Microbiology (2018) Vol. 16, Iss. 7, pp. 410-422
Closed Access | Times Cited: 1408
Soil microbiomes and climate change
Janet Jansson, Kirsten Hofmockel
Nature Reviews Microbiology (2019) Vol. 18, Iss. 1, pp. 35-46
Open Access | Times Cited: 1156
Soil nematode abundance and functional group composition at a global scale
Johan van den Hoogen, Stefan Geisen, Devin Routh, et al.
Nature (2019) Vol. 572, Iss. 7768, pp. 194-198
Open Access | Times Cited: 924
Deciphering cell–cell interactions and communication from gene expression
Erick Armingol, Adam Officer, Olivier Harismendy, et al.
Nature Reviews Genetics (2020) Vol. 22, Iss. 2, pp. 71-88
Open Access | Times Cited: 891
Towards the sustainable discovery and development of new antibiotics
Marcus Miethke, Marco Pieroni, Tilmann Weber, et al.
Nature Reviews Chemistry (2021) Vol. 5, Iss. 10, pp. 726-749
Open Access | Times Cited: 797
American Gut: an Open Platform for Citizen Science Microbiome Research
Daniel McDonald, Embriette R. Hyde, Justine W. Debelius, et al.
mSystems (2018) Vol. 3, Iss. 3
Open Access | Times Cited: 731
DRAM for distilling microbial metabolism to automate the curation of microbiome function
Michael Shaffer, Mikayla Borton, Bridget McGivern, et al.
Nucleic Acids Research (2020) Vol. 48, Iss. 16, pp. 8883-8900
Open Access | Times Cited: 707
Global diversity and biogeography of bacterial communities in wastewater treatment plants
Linwei Wu, Daliang Ning, Bing Zhang, et al.
Nature Microbiology (2019) Vol. 4, Iss. 7, pp. 1183-1195
Open Access | Times Cited: 685
Sequence and cultivation study of Muribaculaceae reveals novel species, host preference, and functional potential of this yet undescribed family
Ilias Lagkouvardos, Till Robin Lesker, Thomas C. A. Hitch, et al.
Microbiome (2019) Vol. 7, Iss. 1
Open Access | Times Cited: 627
Bacterial–fungal interactions: ecology, mechanisms and challenges
Aurélie Deveau, Gregory Bonito, Jessie K. Uehling, et al.
FEMS Microbiology Reviews (2018) Vol. 42, Iss. 3, pp. 335-352
Open Access | Times Cited: 576
Qiita: rapid, web-enabled microbiome meta-analysis
Antonio González, José A. Navas-Molina, Tomasz Kościółek, et al.
Nature Methods (2018) Vol. 15, Iss. 10, pp. 796-798
Open Access | Times Cited: 553
Gut microbiota utilize immunoglobulin A for mucosal colonization
Gregory P. Donaldson, Mark S. Ladinsky, Kristie B. Yu, et al.
Science (2018) Vol. 360, Iss. 6390, pp. 795-800
Open Access | Times Cited: 551
RESCRIPt: Reproducible sequence taxonomy reference database management
Michael S. Robeson, Devon O’Rourke, Benjamin D. Kaehler, et al.
PLoS Computational Biology (2021) Vol. 17, Iss. 11, pp. e1009581-e1009581
Open Access | Times Cited: 526
MGnify: the microbiome analysis resource in 2020
Alex Mitchell, Alexandre Almeida, Martín Beracochea, et al.
Nucleic Acids Research (2019)
Open Access | Times Cited: 507
Phylogenetic Placement of Exact Amplicon Sequences Improves Associations with Clinical Information
Stefan Janssen, Daniel McDonald, Antonio González, et al.
mSystems (2018) Vol. 3, Iss. 3
Open Access | Times Cited: 477
From hairballs to hypotheses–biological insights from microbial networks
Lisa Röttjers, Karoline Faust
FEMS Microbiology Reviews (2018) Vol. 42, Iss. 6, pp. 761-780
Open Access | Times Cited: 471
The future of biotic indices in the ecogenomic era: Integrating (e)DNA metabarcoding in biological assessment of aquatic ecosystems
Jan Pawłowski, Mary Kelly‐Quinn, Florian Altermatt, et al.
The Science of The Total Environment (2018) Vol. 637-638, pp. 1295-1310
Open Access | Times Cited: 466
Strength of species interactions determines biodiversity and stability in microbial communities
Christoph Ratzke, Julien Barrere, Jeff Gore
Nature Ecology & Evolution (2020) Vol. 4, Iss. 3, pp. 376-383
Open Access | Times Cited: 466
The Madness of Microbiome: Attempting To Find Consensus “Best Practice” for 16S Microbiome Studies
Jolinda Pollock, Laura Glendinning, Trong Wisedchanwet, et al.
Applied and Environmental Microbiology (2018) Vol. 84, Iss. 7
Open Access | Times Cited: 463
FEAST: fast expectation-maximization for microbial source tracking
Liat Shenhav, Michael Thompson, Tyler Joseph, et al.
Nature Methods (2019) Vol. 16, Iss. 7, pp. 627-632
Open Access | Times Cited: 406
Current challenges and best-practice protocols for microbiome analysis
Richa Bharti, Dominik G. Grimm
Briefings in Bioinformatics (2019) Vol. 22, Iss. 1, pp. 178-193
Open Access | Times Cited: 404
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