OpenAlex Citation Counts

OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

MS²Rescore 3.0 Is a Modular, Flexible, and User-Friendly Platform to Boost Peptide Identifications, as Showcased with MS Amanda 3.0
Louise Marie Buur, Arthur Declercq, Marina Strobl, et al.
Journal of Proteome Research (2024) Vol. 23, Iss. 8, pp. 3200-3207
Open Access | Times Cited: 16

Showing 16 citing articles:

Thunder-DDA-PASEF enables high-coverage immunopeptidomics and is boosted by MS2Rescore with MS2PIP timsTOF fragmentation prediction model
David Gomez‐Zepeda, Danielle Arnold-Schild, Julian Beyrle, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 19

TIMS²Rescore: A Data Dependent Acquisition-Parallel Accumulation and Serial Fragmentation-Optimized Data-Driven Rescoring Pipeline Based on MS²Rescore
Arthur Declercq, Robbe Devreese, Jonas Scheid, et al.
Journal of Proteome Research (2025)
Open Access | Times Cited: 3

Rescoring Peptide Spectrum Matches: Boosting Proteomics Performance by Integrating Peptide Property Predictors into Peptide Identification
Mostafa Kalhor, Joel Lapin, Mario Picciani, et al.
Molecular & Cellular Proteomics (2024) Vol. 23, Iss. 7, pp. 100798-100798
Open Access | Times Cited: 9

Maximizing Immunopeptidomics-Based Bacterial Epitope Discovery by Multiple Search Engines and Rescoring
Patrick J. Willems, Fabien Théry, Laura Van Moortel, et al.
Journal of Proteome Research (2025)
Open Access

Trends in Mass Spectrometry-Based Single-Cell Proteomics
Ximena Sanchez-Avila, Raphaela Menezes de Oliveira, Siqi Huang, et al.
Analytical Chemistry (2025)
Closed Access

Rustims: An Open-Source Framework for Rapid Development and Processing of timsTOF Data-Dependent Acquisition Data
David Teschner, David Gomez‐Zepeda, Mateusz Krzysztof Łącki, et al.
Journal of Proteome Research (2025)
Open Access

An Approach to Integrate Metagenomics, Metatranscriptomics and Metaproteomics Data in Public Data Resources
Shengbo Wang, Satwant Kaur, Benoît J. Kunath, et al.
PROTEOMICS (2025)
Open Access

TIMS²Rescore: A DDA-PASEF optimized data-driven rescoring pipeline based on MS²Rescore
Arthur Declercq, Robbe Devreese, Jonas Scheid, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3

High-coverage immunopeptidomics using timsTOF mass spectrometers with Thunder-DDA-PASEF boosted by MS2Rescore
David Gomez‐Zepeda, Julian Beyrle, Annica Preikschat, et al.
Research Square (Research Square) (2024)
Open Access | Times Cited: 1

UniScore, a unified and universal measure for peptide identification by multiple search engines
Tsuyoshi Tabata, Akiyasu C. Yoshizawa, Kosuke Ogata, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

MultiStageSearch: a multi-step proteogenomic workflow for taxonomic identification of viral proteome samples adressing database bias
Julian Pipart, Tanja Holstein, Lennart Martens, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

Celebrating Women in Proteomics and Metabolomics
Ileana M. Cristea, Claire E. Eyers
Journal of Proteome Research (2024) Vol. 23, Iss. 8, pp. 2675-2679
Open Access

Proteomics Can Rise to the Challenge of Pseudogenes’ Coding Nature
Valeriia Vasylieva, Ihor Arefiev, Francis Bourassa, et al.
Journal of Proteome Research (2024)
Open Access

Maximizing immunopeptidomics-based bacterial epitope discovery by multiple search engines and rescoring
Patrick J. Willems, Fabien Théry, Laura Van Moortel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

Proteome-wide non-cleavable crosslink identification with MS Annika 3.0 reveals the structure of the C. elegans Box C/D complex
Micha J. Birklbauer, Fränze Müller, Sowmya Sivakumar Geetha, et al.
Communications Chemistry (2024) Vol. 7, Iss. 1
Open Access

ProtGraph: a tool for the quick and comprehensive exploration and exploitation of the peptide search space derived from protein sequence databases using graphs
Dominik Lux, Katrin Marcus, Martin Eisenacher, et al.
Briefings in Bioinformatics (2024) Vol. 26, Iss. 1
Open Access

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Requested Article:

Showing 16 citing articles:

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