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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

When the Dust Has Settled: Calculation of Binding Affinities from First Principles for SARS-CoV-2 Variants with Quantitative Accuracy
Emma Goulard Coderc de Lacam, Marharyta Blazhynska, Haochuan Chen, et al.
Journal of Chemical Theory and Computation (2022) Vol. 18, Iss. 10, pp. 5890-5900
Closed Access | Times Cited: 20

Showing 20 citing articles:

SARS-CoV-2 Omicron Subvariants Do Not Differ Much in Binding Affinity to Human ACE2: A Molecular Dynamics Study
Hoang Linh Nguyen, Thai Quoc Nguyen, Mai Suan Li
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 14, pp. 3340-3349
Open Access | Times Cited: 10
Binding affinity estimation from restrained umbrella sampling simulations
Vivek Govind Kumar, Adithya Polasa, Shilpi Agrawal, et al.
Nature Computational Science (2022) Vol. 3, Iss. 1, pp. 59-70
Open Access | Times Cited: 31
Biophysical principles predict fitness of SARS-CoV-2 variants
D. I. C. Wang, Marian Huot, Vaibhav Mohanty, et al.
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 23
Open Access | Times Cited: 6
Identification of novel inhibitors for epidermal growth factor receptor tyrosine kinase using absolute binding free-energy simulations
Huaxin Zhou, Haohao Fu, Xueguang Shao, et al.
International Journal of Biological Macromolecules (2025), pp. 140989-140989
Closed Access
How helpful were molecular dynamics simulations in shaping our understanding of SARS-CoV-2 spike protein dynamics?
Jameel M. Abduljalil, Ahmed M. Elghareib, Ahmed Samir, et al.
International Journal of Biological Macromolecules (2023) Vol. 242, pp. 125153-125153
Open Access | Times Cited: 12
Deciphering the free energy landscapes of SARS-CoV-2 wild type and Omicron variant interacting with human ACE2
Pham Dang Lan, Daniel A. Nissley, Edward P. O’Brien, et al.
The Journal of Chemical Physics (2024) Vol. 160, Iss. 5
Closed Access | Times Cited: 3
A computationally designed ACE2 decoy has broad efficacy against SARS-CoV-2 omicron variants and related viruses in vitro and in vivo
Brandon Havranek, Graeme Walker Lindsey, Yusuke Higuchi, et al.
Communications Biology (2023) Vol. 6, Iss. 1
Open Access | Times Cited: 9
Assessing Metadynamics and Docking for Absolute Binding Free Energy Calculations Using Severe Acute Respiratory Syndrome Coronavirus 2 Main Protease Inhibitors
Anastasia Saar, Mohammad Mehdi Ghahremanpour, Julian Tirado‐Rives, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 22, pp. 7210-7218
Closed Access | Times Cited: 9
Many Roles of Carbohydrates: A Computational Spotlight on the Coronavirus S Protein Binding
Suman Maity, Atanu Acharya
ACS Applied Bio Materials (2023) Vol. 7, Iss. 2, pp. 646-656
Open Access | Times Cited: 7
A Rigorous Framework for Calculating Protein–Protein Binding Affinities in Membranes
Marharyta Blazhynska, James C. Gumbart, Haochuan Chen, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 24, pp. 9077-9092
Closed Access | Times Cited: 7
Boosting Enzyme Activity in Biomass Conversion by Modulating the Hydrolysis Process of Cellobiohydrolases
Han Liu, Yu Ding, Scott Mazurkewich, et al.
ACS Catalysis (2024) Vol. 14, Iss. 21, pp. 16044-16054
Closed Access | Times Cited: 1
Achieving Accurate Standard Protein–Protein Binding Free Energy Calculations through the Geometrical Route and Ergodic Sampling
Haohao Fu, Christophe Chipot, Xueguang Shao, et al.
Journal of Chemical Information and Modeling (2023) Vol. 63, Iss. 8, pp. 2512-2519
Closed Access | Times Cited: 4
Improving Speed and Affordability without Compromising Accuracy: Standard Binding Free-Energy Calculations Using an Enhanced Sampling Algorithm, Multiple-Time Stepping, and Hydrogen Mass Repartitioning
Marharyta Blazhynska, Emma Goulard Coderc de Lacam, Haochuan Chen, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 11, pp. 3091-3101
Closed Access | Times Cited: 3
Revealing the Molecular Interactions between Human ACE2 and the Receptor Binding Domain of the SARS-CoV-2 Wild-Type, Alpha and Delta Variants
Cécilia Hognon, Emmanuelle Bignon, Antonio Monari, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 3, pp. 2517-2517
Open Access | Times Cited: 2
How SARS-CoV-2 Alters the Regulation of Gene Expression in Infected Cells
Emmanuelle Bignon, Stéphanie Grandemange, Élise Dumont, et al.
The Journal of Physical Chemistry Letters (2023) Vol. 14, Iss. 13, pp. 3199-3207
Open Access | Times Cited: 2
Mechanism of the Covalent Inhibition of Human Transmembrane Protease Serine 2 as an Original Antiviral Strategy
Angelo Spinello, Luisa D’Anna, Emmanuelle Bignon, et al.
The Journal of Physical Chemistry B (2023) Vol. 127, Iss. 28, pp. 6287-6295
Open Access | Times Cited: 1
Mechanism of the Covalent Inhibition of Human Transmembrane Protease Serine 2 as an Original Antiviral Strategy
Angelo Spinello, Luisa D’Anna, Emmanuelle Bignon, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
Molecular Dynamics and QM/MM to Understand Genome Organization and Reproduction in Emerging RNA Viruses
Emmanuelle Bignon, Antonio Monari
Elsevier eBooks (2023), pp. 895-909
Closed Access
Biophysical principles predict fitness of SARS-CoV-2 variants
D. I. C. Wang, Marian Huot, Vaibhav Mohanty, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
How SARS-CoV-2 alters the regulation of gene expression in infected cells†
Emmanuelle Bignon, Stéphanie Grandemange, Élise Dumont, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access
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