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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Markov State Models and Molecular Dynamics Simulations Reveal the Conformational Transition of the Intrinsically Disordered Hypervariable Region of K-Ras4B to the Ordered Conformation
Hao Zhang, Duan Ni, Jigang Fan, et al.
Journal of Chemical Information and Modeling (2022) Vol. 62, Iss. 17, pp. 4222-4231
Closed Access | Times Cited: 25

Showing 25 citing articles:

Binding Mechanism of Inhibitors to BRD4 and BRD9 Decoded by Multiple Independent Molecular Dynamics Simulations and Deep Learning
Jian Wang, Wanchun Yang, Lu Zhao, et al.
Molecules (2024) Vol. 29, Iss. 8, pp. 1857-1857
Open Access | Times Cited: 10
AlloReverse: multiscale understanding among hierarchical allosteric regulations
Jinyin Zha, Qian Li, Xinyi Liu, et al.
Nucleic Acids Research (2023) Vol. 51, Iss. W1, pp. W33-W38
Open Access | Times Cited: 18
Unveiling the State Transition Mechanisms of Ras Proteins through Enhanced Sampling and QM/MM Simulations
Fangchen Hu, Yiqiu Wang, Juan Zeng, et al.
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 6, pp. 1418-1427
Closed Access | Times Cited: 5
Single cell spatial biology over developmental time can decipher pediatric brain pathologies
Ruth Nussinov, Bengi Ruken Yavuz, Hyunbum Jang
Neurobiology of Disease (2024) Vol. 199, pp. 106597-106597
Open Access | Times Cited: 5
Computational Elucidation of a Monobody Targeting the Phosphatase Domain of SHP2
Yang Wang, Xin Qiao, Ruidi Zhu, et al.
Biomolecules (2025) Vol. 15, Iss. 2, pp. 217-217
Open Access
Identifying Inhibitor-SARS-CoV2-3CLpro Binding Mechanism Through Molecular Docking, GaMD Simulations, Correlation Network Analysis and MM-GBSA Calculations
Jianzhong Chen, Jian Wang, Wanchun Yang, et al.
Molecules (2025) Vol. 30, Iss. 4, pp. 805-805
Open Access
Probing the role of zinc ion in metallo-β-lactamase inhibitor binding by using multiple molecular dynamics simulations
Guodong Zheng, Wuxia Liu, Young-Ku Kang, et al.
Results in Chemistry (2025) Vol. 15, pp. 102171-102171
Open Access
Predicting Conformational Ensembles of Intrinsically Disordered Proteins: From Molecular Dynamics to Machine Learning
Jana Aupič, Pavlína Pokorná, Sharon Ruthstein, et al.
The Journal of Physical Chemistry Letters (2024) Vol. 15, Iss. 32, pp. 8177-8186
Closed Access | Times Cited: 3
Decoding the Conformational Selective Mechanism of FGFR Isoforms: A Comparative Molecular Dynamics Simulation
Mingyang Zhang, Miersalijiang Yasen, Shaoyong Lu, et al.
Molecules (2023) Vol. 28, Iss. 6, pp. 2709-2709
Open Access | Times Cited: 9
Structural and energetic insights into the selective inhibition of PKMYT1 against WEE1
Xuesen Qi, Guozhen Li, Jiahai Liu, et al.
Journal of Biomolecular Structure and Dynamics (2023) Vol. 42, Iss. 6, pp. 3010-3018
Closed Access | Times Cited: 9
Designing drugs and chemical probes with the dualsteric approach
Jinyin Zha, Jixiao He, Chengwei Wu, et al.
Chemical Society Reviews (2023) Vol. 52, Iss. 24, pp. 8651-8677
Closed Access | Times Cited: 9
The switch states of the GDP-bound HRAS affected by point mutations: a study from Gaussian accelerated molecular dynamics simulations and free energy landscapes
Huayin Bao, Wei Wang, Haibo Sun, et al.
Journal of Biomolecular Structure and Dynamics (2023) Vol. 42, Iss. 7, pp. 3363-3381
Closed Access | Times Cited: 8
The allosteric effect of the upper half of SENP1 contributes to its substrate selectivity for SUMO1 over SUMO2
Yuxin Shi, Miersalijiang Yasen, Zhijun Wang, et al.
Journal of Biomolecular Structure and Dynamics (2023) Vol. 41, Iss. 21, pp. 12372-12386
Closed Access | Times Cited: 5
Classification of GTP-dependent K-Ras4B active and inactive conformational states
Brajesh Narayan, Christina Kiel, Nicolae‐Viorel Buchete
The Journal of Chemical Physics (2023) Vol. 158, Iss. 9
Open Access | Times Cited: 5
A three-level regulatory mechanism of the aldo-keto reductase subfamily AKR12D
Zhihong Xiao, Jinyin Zha, Xu Yang, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 1
Mutations influence the conformational dynamics of the GDP/KRAS complex
Congcong Shen, Jie Yin, Min Wang, et al.
Journal of Biomolecular Structure and Dynamics (2024), pp. 1-14
Closed Access | Times Cited: 1
Molecular dynamics simulations for the structure-based drug design: targeting small-GTPases proteins
Angela Parise, Sofia Cresca, Alessandra Magistrato
Expert Opinion on Drug Discovery (2024) Vol. 19, Iss. 10, pp. 1259-1279
Closed Access | Times Cited: 1
Computational Dissection of the Role of Trp305 in the Regulation of the Death-Associated Protein Kinase–Calmodulin Interaction
Yu-Ping Zhu, Xinyi Gao, Guo-Hui Xu, et al.
Biomolecules (2022) Vol. 12, Iss. 10, pp. 1395-1395
Open Access | Times Cited: 8
Decoupling the dynamic mechanism revealed by FGFR2 mutation-induced population shift
Yuxiang Zhang, Xiaolan Yin, Mingfei Ji, et al.
Journal of Biomolecular Structure and Dynamics (2023) Vol. 42, Iss. 4, pp. 1940-1951
Closed Access | Times Cited: 4
Mechanistic insights into the allosteric inactivation mechanism of ZAP-70 induced by the hot spot W165C mutation
Mingtai Hu, Wencong Ma, Jinghan Wang, et al.
Journal of Biomolecular Structure and Dynamics (2023) Vol. 42, Iss. 14, pp. 7600-7609
Closed Access | Times Cited: 4
Mechanistic Insights into the Protection Effect of Argonaute–RNA Complex on the HCV Genome
Haiming Zhuang, Dong Ji, Jigang Fan, et al.
Biomolecules (2022) Vol. 12, Iss. 11, pp. 1631-1631
Open Access | Times Cited: 6
Insights into pralsetinib resistance to the non-gatekeeper RET kinase G810C mutation through molecular dynamics simulations
Shu Cao, Changbin Tan, Anhua Fei, et al.
Journal of Molecular Modeling (2022) Vol. 29, Iss. 1
Closed Access | Times Cited: 6
Computational Insights into the Resistance of the Gatekeeper Mutation V564F of FGFR2 Against Pemigatinib
Jiayu Liu, Qi Jin, Jingying Xia, et al.
Journal of Computational Biophysics and Chemistry (2024) Vol. 23, Iss. 07, pp. 891-900
Closed Access
Stereo-selectivity of enantiomeric inhibitors to ubiquitin-specific protease 7 (USP7) dissected by molecular docking, molecular dynamics simulations, and binding free energy calculations
Yusheng Zhang, Wenwen Dou, Ziqi Zhao, et al.
Molecular Diversity (2024)
Closed Access
Deconstructing allostery by computational assessment of the binding determinants of allosteric PTP1B modulators
Adele Hardie, Benjamin P. Cossins, Silvia Lovera, et al.
Communications Chemistry (2023) Vol. 6, Iss. 1
Open Access
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