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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Accurate Prediction of GPCR Ligand Binding Affinity with Free Energy Perturbation
Francesca Deflorian, Laura Pérez‐Benito, Eelke B. Lenselink, et al.
Journal of Chemical Information and Modeling (2020) Vol. 60, Iss. 11, pp. 5563-5579
Closed Access | Times Cited: 75

Showing 1-25 of 75 citing articles:

Best Practices for Alchemical Free Energy Calculations [Article v1.0]
Antonia S. J. S. Mey, Bryce K. Allen, Hannah E. Bruce Macdonald, et al.
Living Journal of Computational Molecular Science (2020) Vol. 2, Iss. 1
Open Access | Times Cited: 208
Structure-Based Virtual Screening for Ligands of G Protein–Coupled Receptors: What Can Molecular Docking Do for You?
Flavio Ballante, Albert J. Kooistra, Stefanie Kampen, et al.
Pharmacological Reviews (2021) Vol. 73, Iss. 4, pp. 1698-1736
Open Access | Times Cited: 104
Protein–Ligand Docking in the Machine-Learning Era
Chao Yang, Eric Anthony Chen, Yingkai Zhang
Molecules (2022) Vol. 27, Iss. 14, pp. 4568-4568
Open Access | Times Cited: 83
The maximal and current accuracy of rigorous protein-ligand binding free energy calculations
Gregory A. Ross, Chao Lü, Guido Scarabelli, et al.
Communications Chemistry (2023) Vol. 6, Iss. 1
Open Access | Times Cited: 60
Past, Present, and Future Perspectives on Computer-Aided Drug Design Methodologies
Davide Bassani, Stefano Moro
Molecules (2023) Vol. 28, Iss. 9, pp. 3906-3906
Open Access | Times Cited: 53
Best Practices for Constructing, Preparing, and Evaluating Protein-Ligand Binding Affinity Benchmarks [Article v1.0]
David F. Hahn, Christopher I. Bayly, Melissa L. Boby, et al.
Living Journal of Computational Molecular Science (2022) Vol. 4, Iss. 1
Open Access | Times Cited: 57
Free Energy Methods in Drug Discovery—Introduction
Zoe Cournia, Christophe Chipot, Benoı̂t Roux, et al.
ACS symposium series (2021), pp. 1-38
Closed Access | Times Cited: 56
Integrated Molecular Modeling and Machine Learning for Drug Design
Song Xia, Eric Chen, Yingkai Zhang
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 21, pp. 7478-7495
Open Access | Times Cited: 28
Broadening the Scope of Binding Free Energy Calculations Using a Separated Topologies Approach
Hannah M. Baumann, Eric Dybeck, Christopher L. McClendon, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 15, pp. 5058-5076
Open Access | Times Cited: 24
Understanding the impact of binding free energy and kinetics calculations in modern drug discovery
Victor Ayo Adediwura, Kushal Koirala, N. Hung, et al.
Expert Opinion on Drug Discovery (2024) Vol. 19, Iss. 6, pp. 671-682
Closed Access | Times Cited: 9
Inhibitor binding influences the protonation states of histidines in SARS-CoV-2 main protease
Ànna Pavlova, Diane L. Lynch, Isabella Daidone, et al.
Chemical Science (2020) Vol. 12, Iss. 4, pp. 1513-1527
Open Access | Times Cited: 54
A Cloud Computing Platform for Scalable Relative and Absolute Binding Free Energy Predictions: New Opportunities and Challenges for Drug Discovery
Zhixiong Lin, Junjie Zou, Shuai Liu, et al.
Journal of Chemical Information and Modeling (2021) Vol. 61, Iss. 6, pp. 2720-2732
Closed Access | Times Cited: 44
Mechanistic Understanding from Molecular Dynamics in Pharmaceutical Research 2: Lipid Membrane in Drug Design
Tomasz Róg, Mykhailo Girych, Alex Bunker
Pharmaceuticals (2021) Vol. 14, Iss. 10, pp. 1062-1062
Open Access | Times Cited: 42
Prioritizing Small Sets of Molecules for Synthesis throughin‐silicoTools: A Comparison of Common Ranking Methods
Marko Breznik, Ge Yunhui, Joseph P. Bluck, et al.
ChemMedChem (2022) Vol. 18, Iss. 1
Open Access | Times Cited: 33
PyAutoFEP: An Automated Free Energy Perturbation Workflow for GROMACS Integrating Enhanced Sampling Methods
Luan Carvalho Martins, Elio A. Cino, Rafaela Salgado Ferreira
Journal of Chemical Theory and Computation (2021) Vol. 17, Iss. 7, pp. 4262-4273
Closed Access | Times Cited: 35
Design of Drug Efficacy Guided by Free Energy Simulations of the β2‐Adrenoceptor
Nicolas Panel, Duc Duy Vo, Nour Aldin Kahlous, et al.
Angewandte Chemie International Edition (2023) Vol. 62, Iss. 22
Open Access | Times Cited: 15
Computational Workflow for Refining AlphaFold Models in Drug Design Using Kinetic and Thermodynamic Binding Calculations: A Case Study for the Unresolved Inactive Human Adenosine A3 Receptor
Margarita Stampelou, Graham Ladds, Antonios Kolocouris
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 4, pp. 914-936
Closed Access | Times Cited: 5
Alchemical Transformations and Beyond: Recent Advances and Real-World Applications of Free Energy Calculations in Drug Discovery
Runtong Qian, Jing Xue, You Xu, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 19, pp. 7214-7237
Closed Access | Times Cited: 5
Ligand-Induced Biased Activation of GPCRs: Recent Advances and New Directions from In Silico Approaches
Shaima Hashem, Alexis Dougha, Pierre Tufféry
Molecules (2025) Vol. 30, Iss. 5, pp. 1047-1047
Open Access
Structural insights into lipid chain-length selectivity and allosteric regulation of FFA2
Mai Kugawa, Kouki Kawakami, Ryoji Kise, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access
Can molecular dynamics simulations improve the structural accuracy and virtual screening performance of GPCR models?
Jon Kapla, Ismael Rodríguez‐Espigares, Flavio Ballante, et al.
PLoS Computational Biology (2021) Vol. 17, Iss. 5, pp. e1008936-e1008936
Open Access | Times Cited: 26
The accelerated weight histogram method for alchemical free energy calculations
Magnus Lundborg, Jack Lidmar, Berk Hess
The Journal of Chemical Physics (2021) Vol. 154, Iss. 20
Open Access | Times Cited: 26
Alchemical Free Energy Calculations on Membrane-Associated Proteins
Michail Papadourakis, Hryhory Sinenka, Pierre Matricon, et al.
Journal of Chemical Theory and Computation (2023) Vol. 19, Iss. 21, pp. 7437-7458
Open Access | Times Cited: 10
HydraScreen: A Generalizable Structure-Based Deep Learning Approach to Drug Discovery
Alvaro Prat, Hisham Abdel Aty, Orestis Bastas, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 15, pp. 5817-5831
Open Access | Times Cited: 3
Ketamine Metabolite (2R,6R)-Hydroxynorketamine Interacts with μ and κ Opioid Receptors
Thomas T. Joseph, Weiming Bu, Wen‐Zhen Lin, et al.
ACS Chemical Neuroscience (2021) Vol. 12, Iss. 9, pp. 1487-1497
Open Access | Times Cited: 20
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