OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Insertions and Deletions (Indels): A Missing Piece of the Protein Engineering Jigsaw
C.M. Miton, Nobuhiko Tokuriki
Biochemistry (2022) Vol. 62, Iss. 2, pp. 148-157
Closed Access | Times Cited: 29

Showing 1-25 of 29 citing articles:

Machine Learning-Guided Protein Engineering
Petr Kouba, Pavel Kohout, Faraneh Haddadi, et al.
ACS Catalysis (2023) Vol. 13, Iss. 21, pp. 13863-13895
Open Access | Times Cited: 65

Molecular determinants of protein evolvability
Karol Buda, C.M. Miton, Xingyu Cara Fan, et al.
Trends in Biochemical Sciences (2023) Vol. 48, Iss. 9, pp. 751-760
Closed Access | Times Cited: 20

Learning Epistasis and Residue Coevolution Patterns: Current Trends and Future Perspectives for Advancing Enzyme Engineering
Marcel Wittmund, Frédéric Cadet, Mehdi D. Davari
ACS Catalysis (2022) Vol. 12, Iss. 22, pp. 14243-14263
Closed Access | Times Cited: 33

Base editor screens for in situ mutational scanning at scale
Nicholas Z. Lue, Brian B. Liau
Molecular Cell (2023) Vol. 83, Iss. 13, pp. 2167-2187
Open Access | Times Cited: 16

Indels allow antiviral proteins to evolve functional novelty inaccessible by missense mutations
Jeannette L. Tenthorey, Serena del Banco, Ishrak Ramzan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 5

Remote loop evolution reveals a complex biological function for chitinase enzymes beyond the active site
Dan Kozome, Adnan Sljoka, Paola Laurino
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 4

Deep indel mutagenesis reveals the impact of amino acid insertions and deletions on protein stability and function
Magdalena Topolska, Toni Beltran, Ben Lehner
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 13

Selection of a promiscuous minimalist cAMP phosphodiesterase from a library of de novo designed proteins
J. David Schnettler, Michael S. Wang, Maximilian Gantz, et al.
Nature Chemistry (2024) Vol. 16, Iss. 7, pp. 1200-1208
Open Access | Times Cited: 3

Optimal phylogenetic reconstruction of insertion and deletion events
Sanjana Tule, Gabriel Foley, Chongting Zhao, et al.
Bioinformatics (2024) Vol. 40, Iss. Supplement_1, pp. i277-i286
Open Access | Times Cited: 2

Creation and optimization of artificial metalloenzymes: Harnessing the power of directed evolution and beyond
Zhi Zou, Bradley Higginson, Thomas R. Ward
Chem (2024) Vol. 10, Iss. 8, pp. 2373-2389
Open Access | Times Cited: 1

A cellular selection identifies elongated flavodoxins that support electron transfer to sulfite reductase
Albert Truong, Dru Myerscough, Ian Campbell, et al.
Protein Science (2023) Vol. 32, Iss. 10
Open Access | Times Cited: 4

Epistatic Effects Between Amino Acid Insertions and Substitutions Mediate Toxin resistance of Vertebrate Na+,K+-ATPases
Shabnam Mohammadi, Halil İbrahim Özdemir, Pemra Özbek, et al.
Molecular Biology and Evolution (2022) Vol. 39, Iss. 12
Open Access | Times Cited: 8

Leveraging ancestral sequence reconstruction for protein representation learning
D. S. Matthews, Matthew A. Spence, Adam C. Mater, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4

Mind the gap
Sven Larsen-Ledet, Amelie Stein
Structure (2023) Vol. 31, Iss. 6, pp. 641-643
Open Access | Times Cited: 2

Optimal Phylogenetic Reconstruction of Insertion and Deletion Events
Sanjana Tule, Gabriel Foley, Chongting Zhao, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

Persistent homology reveals strong phylogenetic signal in 3D protein structures
Léa Bou Dagher, Dominique Madern, Philippe Malbos, et al.
PNAS Nexus (2024) Vol. 3, Iss. 4
Open Access

Crispant analysis in zebrafish as a tool for rapid functional screening of disease-causing genes for bone fragility
Sophie Debaenst, Tamara Jarayseh, Hanna De Saffel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Closed Access

Systematic characterization of indel variants using a yeast-based protein folding sensor
Sven Larsen-Ledet, Søren Lindemose, Aleksandra Panfilova, et al.
(2024)
Closed Access

Leveraging ancestral sequence reconstruction for protein representation learning
D. S. Matthews, Matthew A. Spence, Adam C. Mater, et al.
Nature Machine Intelligence (2024) Vol. 6, Iss. 12, pp. 1542-1555
Closed Access

Systematic characterization of indel variants using a yeast-based protein folding sensor
Sven Larsen-Ledet, Søren Lindemose, Aleksandra Panfilova, et al.
Structure (2024)
Closed Access

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