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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Direct detection of RNA modifications and structure using single-molecule nanopore sequencing
William Stephenson, Roham Razaghi, Steven Busan, et al.
Cell Genomics (2022) Vol. 2, Iss. 2, pp. 100097-100097
Open Access | Times Cited: 110

Showing 1-25 of 110 citing articles:

Nanopore sequencing technology, bioinformatics and applications
Yunhao Wang, Yue Zhao, Audrey Bollas, et al.
Nature Biotechnology (2021) Vol. 39, Iss. 11, pp. 1348-1365
Open Access | Times Cited: 1103
Quantitative analysis of tRNA abundance and modifications by nanopore RNA sequencing
Morghan C. Lucas, Leszek P. Pryszcz, Rebeca Medina, et al.
Nature Biotechnology (2023) Vol. 42, Iss. 1, pp. 72-86
Open Access | Times Cited: 108
Advances and opportunities in RNA structure experimental determination and computational modeling
Jinsong Zhang, Yuhan Fei, Lei Sun, et al.
Nature Methods (2022) Vol. 19, Iss. 10, pp. 1193-1207
Open Access | Times Cited: 95
Genomics in the long-read sequencing era
Erwin L. van Dijk, Delphine Naquin, Kévin Gorrichon, et al.
Trends in Genetics (2023) Vol. 39, Iss. 9, pp. 649-671
Closed Access | Times Cited: 73
An Introduction to Nanopore Sequencing: Past, Present, and Future Considerations
Morgan MacKenzie, Christos Argyropoulos
Micromachines (2023) Vol. 14, Iss. 2, pp. 459-459
Open Access | Times Cited: 58
Navigating the pitfalls of mapping DNA and RNA modifications
Yimeng Kong, Edward A. Mead, Gang Fang
Nature Reviews Genetics (2023) Vol. 24, Iss. 6, pp. 363-381
Closed Access | Times Cited: 42
Co-transcriptional gene regulation in eukaryotes and prokaryotes
Morgan Shine, Jackson M. Gordon, Leonard Schärfen, et al.
Nature Reviews Molecular Cell Biology (2024) Vol. 25, Iss. 7, pp. 534-554
Closed Access | Times Cited: 24
Transfer learning enables identification of multiple types of RNA modifications using nanopore direct RNA sequencing
You Wu, Wenna Shao, Mengxiao Yan, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 18
Single-molecule epitranscriptomic analysis of full-length HIV-1 RNAs reveals functional roles of site-specific m6As
Alice Baek, Ga-Eun Lee, Sarah Golconda, et al.
Nature Microbiology (2024) Vol. 9, Iss. 5, pp. 1340-1355
Open Access | Times Cited: 17
Charting the epitranscriptomic landscape across RNA biotypes using native RNA nanopore sequencing
Gregor Diensthuber, Eva Maria Novoa
Molecular Cell (2025) Vol. 85, Iss. 2, pp. 276-289
Closed Access | Times Cited: 2
Accurate expression quantification from nanopore direct RNA sequencing with NanoCount
Josie Gleeson, Adrien Léger, Yair D. J. Prawer, et al.
Nucleic Acids Research (2021) Vol. 50, Iss. 4, pp. e19-e19
Open Access | Times Cited: 81
Nanopore Dwell Time Analysis Permits Sequencing and Conformational Assignment of Pseudouridine in SARS-CoV-2
Aaron M. Fleming, Nicole J Mathewson, Shereen A. Howpay Manage, et al.
ACS Central Science (2021) Vol. 7, Iss. 10, pp. 1707-1717
Open Access | Times Cited: 63
Exploring the epitranscriptome by native RNA sequencing
Oguzhan Begik, John S. Mattick, Eva Maria Novoa
RNA (2022) Vol. 28, Iss. 11, pp. 1430-1439
Open Access | Times Cited: 47
Nano-DMS-MaP allows isoform-specific RNA structure determination
Patrick Bohn, Anne-Sophie Gribling-Burrer, Uddhav B. Ambi, et al.
Nature Methods (2023) Vol. 20, Iss. 6, pp. 849-859
Open Access | Times Cited: 24
Direct Nanopore Sequencing for the 17 RNA Modification Types in 36 Locations in the E. coli Ribosome Enables Monitoring of Stress-Dependent Changes
Aaron M. Fleming, Praneeth Bommisetti, Songjun Xiao, et al.
ACS Chemical Biology (2023) Vol. 18, Iss. 10, pp. 2211-2223
Open Access | Times Cited: 24
2′-O-methylation at internal sites on mRNA promotes mRNA stability
Yanqiang Li, Yi Yang, Xinlei Gao, et al.
Molecular Cell (2024) Vol. 84, Iss. 12, pp. 2320-2336.e6
Closed Access | Times Cited: 14
Enhanced detection of RNA modifications and read mapping with high-accuracy nanopore RNA basecalling models
Gregor Diensthuber, Leszek P. Pryszcz, Laia Llovera, et al.
Genome Research (2024) Vol. 34, Iss. 11, pp. 1865-1877
Closed Access | Times Cited: 10
Comparative analysis of 43 distinct RNA modifications by nanopore tRNA sequencing
Laura K. White, Kezia Dobson, Samantha del Pozo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 9
Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment
Sam Kovaka, Paul W. Hook, Katharine M. Jenike, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 8
Modification mapping by nanopore sequencing
Laura K. White, Jay R. Hesselberth
Frontiers in Genetics (2022) Vol. 13
Open Access | Times Cited: 30
RNA structure determination: From 2D to 3D
Jie Deng, Xianyang Fang, Lin Huang, et al.
Fundamental Research (2023) Vol. 3, Iss. 5, pp. 727-737
Open Access | Times Cited: 17
Recent Advances in Nanopore Technology for Copper Detection and Their Potential Applications
Alexander N. Vaneev, Roman V. Timoshenko, Petr V. Gorelkin, et al.
Nanomaterials (2023) Vol. 13, Iss. 9, pp. 1573-1573
Open Access | Times Cited: 16
2′-O-methylation (Nm) in RNA: progress, challenges, and future directions
Katherine I. Zhou, Chad V. Pecot, Christopher L. Holley
RNA (2024) Vol. 30, Iss. 5, pp. 570-582
Open Access | Times Cited: 7
Advances in long-read single-cell transcriptomics
Pallawi Kumari, Manmeet Kaur, Kiran Dindhoria, et al.
Human Genetics (2024) Vol. 143, Iss. 9-10, pp. 1005-1020
Open Access | Times Cited: 6
Single-Molecule Correlated Chemical Probing: A Revolution in RNA Structure Analysis
Anthony M. Mustoe, Chase A. Weidmann, Kevin M. Weeks
Accounts of Chemical Research (2023) Vol. 56, Iss. 7, pp. 763-775
Open Access | Times Cited: 15
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