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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Computational enzyme redesign: large jumps in function
Yinglu Cui, Jinyuan Sun, Bian Wu
Trends in Chemistry (2022) Vol. 4, Iss. 5, pp. 409-419
Closed Access | Times Cited: 36

Showing 1-25 of 36 citing articles:

Role of distal sites in enzyme engineering
Jie Gu, Yan Xu, Yao Nie
Biotechnology Advances (2023) Vol. 63, pp. 108094-108094
Closed Access | Times Cited: 43
Computational redesign of a hydrolase for nearly complete PET depolymerization at industrially relevant high-solids loading
Yinglu Cui, Yanchun Chen, Jinyuan Sun, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 41
Structure-based self-supervised learning enables ultrafast protein stability prediction upon mutation
Jinyuan Sun, Tong Zhu, Yinglu Cui, et al.
The Innovation (2025) Vol. 6, Iss. 1, pp. 100750-100750
Open Access | Times Cited: 1
Practical Machine Learning-Assisted Design Protocol for Protein Engineering: Transaminase Engineering for the Conversion of Bulky Substrates
Marian J. Menke, Yu‐Fei Ao, Uwe T. Bornscheuer
ACS Catalysis (2024) Vol. 14, Iss. 9, pp. 6462-6469
Closed Access | Times Cited: 7
Unlocking the potential of enzyme engineering via rational computational design strategies
Lei Zhou, Chunmeng Tao, Xiaolin Shen, et al.
Biotechnology Advances (2024) Vol. 73, pp. 108376-108376
Closed Access | Times Cited: 7
Computational Enzyme Redesign Enhances Tolerance to Denaturants for Peptide C-Terminal Amidation
Tong Zhu, Jinyuan Sun, Hua Pang, et al.
JACS Au (2024) Vol. 4, Iss. 2, pp. 788-797
Open Access | Times Cited: 6
Data‐Driven Protein Engineering for Improving Catalytic Activity and Selectivity
Yu‐Fei Ao, Mark Dörr, Marian J. Menke, et al.
ChemBioChem (2023) Vol. 25, Iss. 3
Open Access | Times Cited: 19
Structure‐ and Data‐Driven Protein Engineering of Transaminases for Improving Activity and Stereoselectivity
Yu‐Fei Ao, Shuxin Pei, Chao Xiang, et al.
Angewandte Chemie International Edition (2023) Vol. 62, Iss. 23
Open Access | Times Cited: 17
Harnessing generative AI to decode enzyme catalysis and evolution for enhanced engineering
Wen Jun Xie, Arieh Warshel
National Science Review (2023) Vol. 10, Iss. 12
Open Access | Times Cited: 11
Mechanism‐Guided Computational Design of ω‐Transaminase by Reprograming of High‐Energy‐Barrier Steps
Lin Yang, Kaiyue Zhang, Meng Xu, et al.
Angewandte Chemie International Edition (2022) Vol. 61, Iss. 52
Closed Access | Times Cited: 19
Machine learning for metabolic pathway optimization: A review
Yang Cheng, Xinyu Bi, Yameng Xu, et al.
Computational and Structural Biotechnology Journal (2023) Vol. 21, pp. 2381-2393
Open Access | Times Cited: 10
Multidisciplinary approaches for enzyme biocatalysis in pharmaceuticals: protein engineering, computational biology, and nanoarchitectonics
Suhyeon Kim, Seongmin Ga, Hayeon Bae, et al.
EES Catalysis (2023) Vol. 2, Iss. 1, pp. 14-48
Open Access | Times Cited: 10
Data-driven strategies for the computational design of enzyme thermal stability: trends, perspectives, and prospects
Zhixin Dou, Yuqing Sun, Xukai Jiang, et al.
Acta Biochimica et Biophysica Sinica (2023) Vol. 55, Iss. 3, pp. 343-355
Open Access | Times Cited: 9
Deep learning-aided redesign of a hydrolase for near 100% PET depolymerization under industrially relevant conditions
Bian Wu, Yinglu Cui, Yanchun Chen, et al.
Research Square (Research Square) (2023)
Open Access | Times Cited: 6
Curse and Blessing of Non‐Proteinogenic Parts in Computational Enzyme Engineering
Kerlen T. Korbeld, Maximilian J. L. J. Fürst
ChemBioChem (2023) Vol. 24, Iss. 12
Open Access | Times Cited: 6
Structure-based self-supervised learning enables ultrafast prediction of stability changes upon mutation at the protein universe scale
Jinyuan Sun, Tong Zhu, Yinglu Cui, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 5
Efficient production of peptidylglycine α-hydroxylating monooxygenase in yeast for protein C-terminal functionalization
Tong Zhu, Xuanshuo Zhang, Ruifeng Li, et al.
International Journal of Biological Macromolecules (2024) Vol. 263, pp. 130443-130443
Closed Access | Times Cited: 1
Investigating Enzyme Biochemistry by Deep Learning: A Computational Tool for a New Era
Milad Rayka, Morteza Mirzaei, Gholamreza Farnoosh, et al.
Journal of Computational Biophysics and Chemistry (2024) Vol. 23, Iss. 06, pp. 781-799
Closed Access | Times Cited: 1
Machine learning-assisted amidase-catalytic enantioselectivity prediction and rational design of variants for improving enantioselectivity
Zi-Lin Li, Shuxin Pei, Ziying Chen, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 1
Harnessing Generative AI to Decode Enzyme Catalysis and Evolution for Enhanced Engineering
Wen Jun Xie, Arieh Warshel
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
De Novo Computational Design of a Lipase with Hydrolysis Activity towards Middle-Chained Fatty Acid Esters
Jinsha Huang, Xiaoman Xie, Zheng Zhen, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 10, pp. 8581-8581
Open Access | Times Cited: 3
Discovery of Plastics-degrading Enzymes
Mehmet Mervan Çakar, Marija Vuković Domanovac, Zvjezdana Findrik Blažević
Kemija u industriji (2023), Iss. 7-8
Open Access | Times Cited: 2
Affinity-peptide-mediated multi-enzyme self-assembly system enhances dioxygenase catalyzing C–H hydroxylation via in situ α-ketoglutarate generation and H2O2 elimination
Huan Liu, Lunjie Wu, Jie Gu, et al.
Molecular Catalysis (2024) Vol. 555, pp. 113873-113873
Closed Access
Hybrid Computationally Guided Strategies for Engineering a Laminaribiose Phosphorylase to Facilitate the Industrial Production of Laminaribiose In Vitro
Shangshang Sun, Qiangzi Li, Fan Lin, et al.
ACS Sustainable Chemistry & Engineering (2024) Vol. 12, Iss. 9, pp. 3461-3477
Closed Access
Deep Learning-Powered Enzyme Efficiency Boosting with Evolutionary Information
Jaie Woodard, Xiaoqiang Huang
Science Bulletin (2024) Vol. 69, Iss. 10, pp. 1367-1368
Closed Access
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