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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Recent advances in predicting and modeling protein–protein interactions
Jesse Durham, Jing Zhang, Ian R. Humphreys, et al.
Trends in Biochemical Sciences (2023) Vol. 48, Iss. 6, pp. 527-538
Closed Access | Times Cited: 27

Showing 1-25 of 27 citing articles:

Enhanced Protein-Protein Interaction Discovery via AlphaFold-Multimer
Ah‐Ram Kim, Yanhui Hu, Aram Comjean, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 8
High throughput methods to study protein-protein interactions during host-pathogen interactions
Giridhar Chandrasekharan, Meera Unnikrishnan
European Journal of Cell Biology (2024) Vol. 103, Iss. 2, pp. 151393-151393
Open Access | Times Cited: 6
Multi-tissue characterization of the constitutive heterochromatin proteome in Drosophila identifies a link between satellite DNA organization and transposon repression
Ankita Chavan, Lena Skrutl, Federico Uliana, et al.
PLoS Biology (2025) Vol. 23, Iss. 1, pp. e3002984-e3002984
Open Access
Decoding Plant–Pathogen Interactions: A Comprehensive Exploration of Effector–Plant Transcription Factor Dynamics
Hui Xiang, Boris Stojilković, Godelieve Gheysen
Molecular Plant Pathology (2025) Vol. 26, Iss. 1
Open Access
Large language models in bioinformatics: applications and perspectives
Jiajia Liu, Mengyuan Yang, Yankai Yu, et al.
arXiv (Cornell University) (2024)
Open Access | Times Cited: 4
Unlocking protein–protein interactions in plants: a comprehensive review of established and emerging techniques
Alvaro Furones Cuadrado, Daniël Van Damme
Journal of Experimental Botany (2024) Vol. 75, Iss. 17, pp. 5220-5236
Open Access | Times Cited: 2
African Swine Fever Virus Protein–Protein Interaction Prediction
Jacob Fenster, Paul A. Azzinaro, Mark Dinhobl, et al.
Viruses (2024) Vol. 16, Iss. 7, pp. 1170-1170
Open Access | Times Cited: 2
Importance of Inter-residue Contacts for Understanding Protein Folding and Unfolding Rates, Remote Homology, and Drug Design
Balasubramanian Harihar, Konda Mani Saravanan, M. Michael Gromiha, et al.
Molecular Biotechnology (2024)
Closed Access | Times Cited: 1
Computational analysis of propeptide‐containing proteins and prediction of their post‐cleavage conformation changes
Jimin Pei, Lisa N. Kinch, Qian Cong
Proteins Structure Function and Bioinformatics (2024) Vol. 92, Iss. 10, pp. 1206-1219
Open Access | Times Cited: 1
Mass spectrometry-based methods for characterizing transient protein–protein interactions
Clinton G. L. Veale, David J. Clarke
Trends in Chemistry (2024) Vol. 6, Iss. 7, pp. 377-391
Closed Access | Times Cited: 1
Current Trend and Performance Evaluation of Machine Learning Methods for Predicting Host-Pathogen Protein-Protein Interactions
Jerry Emmanuel, Itunuoluwa Isewon, Grace I. Olasehinde, et al.
(2024), pp. 1-14
Closed Access | Times Cited: 1
HDACs MADS-domain protein interaction: a case study of HDA15 and XAL1 in Arabidopsis thaliana
Andrea SanJuan-Badillo, León P. Martínez-Castilla, Ricardo García-Sandoval, et al.
Plant Signaling & Behavior (2024) Vol. 19, Iss. 1
Open Access
Structural comparison of protein-RNA homologous interfaces reveals widespread overall conservation contrasted with versatility in polar contacts
Ikram Mahmoudi, Chloé Quignot, C Martins, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Network modeling approaches for metabolic diseases and diabetes
Apurva Badkas, Maria Pires Pacheco, Thomas Sauter
Current Opinion in Systems Biology (2024) Vol. 39, pp. 100530-100530
Open Access
Studying protein–protein interactions: Latest and most popular approaches
Sama Akbarzadeh, Özlem Coşkun, Başak Günçer
Journal of Structural Biology (2024) Vol. 216, Iss. 4, pp. 108118-108118
Closed Access
In Silico Modeling of Myelin Oligodendrocyte Glycoprotein Disulfide Bond Reduction by Phosphine-Borane Complexes
Raheem Remtulla, Sanjoy Das, Leonard A. Levin
Pharmaceuticals (2024) Vol. 17, Iss. 11, pp. 1417-1417
Open Access
Identification of Laccase Family of Auricularia auricula-judae and Structural Prediction Using Alphafold
J.W. Kim, Youn‐Jin Park, Myoung-Jun Jang
International Journal of Molecular Sciences (2024) Vol. 25, Iss. 21, pp. 11784-11784
Open Access
Adaptive protein coevolution preserves telomere integrity
Sung-Ya Lin, Hannah Futeran, Mia T Levine
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Computational Methods for Disentangling Host-Pathogen Interaction Landscapes
Muhammad‐Redha Abdullah‐Zawawi, Lina Rozano, Muhammad Irfan Abdul Jalal, et al.
Elsevier eBooks (2024)
Closed Access
New insights into protein–protein interaction modulators in drug discovery and therapeutic advance
Hossam Nada, Yongseok Choi, Sung-Do Kim, et al.
Signal Transduction and Targeted Therapy (2024) Vol. 9, Iss. 1
Open Access
Contribution of Artificial Intelligence to the Identification of Protein-Protein Interactions: A Case Study on PAR-3 and Its Partner Adapter Molecule Crk
Fabio D’Amico
Methods in molecular biology (2024), pp. 117-122
Closed Access
Deus Ex Machina? The Rise of Artificial Intelligence in Toxicology
Raymond Lui
Chemical Research in Toxicology (2024) Vol. 37, Iss. 4, pp. 525-527
Open Access
Evolutionary Computation in bioinformatics: A survey
Yanyun Zhang, Cheng Li, Guanyu Chen, et al.
Neurocomputing (2024) Vol. 591, pp. 127758-127758
Closed Access
Structural comparison of homologous protein-RNA interfaces reveals widespread overall conservation contrasted with versatility in polar contacts
Ikram Mahmoudi, Chloé Quignot, C Martins, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 12, pp. e1012650-e1012650
Open Access
Testing the Ability of Protein–Protein Docking Programs to Model Known Complexes: A Project for the Biochemistry Classroom
L. Frank, Blaise R. Koehler, Ryan J. Yoder, et al.
Journal of Chemical Education (2023) Vol. 100, Iss. 10, pp. 3968-3973
Closed Access | Times Cited: 1
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