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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Two's company: studying interspecies relationships with dual RNA-seq
Thomas Wolf, Philipp Kämmer, Sascha Brunke, et al.
Current Opinion in Microbiology (2017) Vol. 42, pp. 7-12
Open Access | Times Cited: 61

Showing 1-25 of 61 citing articles:

Candida parapsilosis: from Genes to the Bedside
Renáta Tóth, Jozef Nosek, Héctor M. Mora‐Montes, et al.
Clinical Microbiology Reviews (2019) Vol. 32, Iss. 2
Open Access | Times Cited: 259
High-resolution analysis of the pneumococcal transcriptome under a wide range of infection-relevant conditions
Rieza Aprianto, Jelle Slager, Siger Holsappel, et al.
Nucleic Acids Research (2018)
Open Access | Times Cited: 94
Systems Biology and Machine Learning in Plant–Pathogen Interactions
Bharat Mishra, Nilesh Kumar, M. Shahid Mukhtar
Molecular Plant-Microbe Interactions (2018) Vol. 32, Iss. 1, pp. 45-55
Open Access | Times Cited: 93
Dual RNA‐sequencing analyses of a coral and its native symbiont during the establishment of symbiosis
Amin R. Mohamed, Natalia Andrade, Aurélie Moya, et al.
Molecular Ecology (2020) Vol. 29, Iss. 20, pp. 3921-3937
Closed Access | Times Cited: 51
The hidden world within plants: metatranscriptomics unveils the complexity of wood microbiomes
Luca Nerva, Jadran F. García, Francesco Favaretto, et al.
Journal of Experimental Botany (2022) Vol. 73, Iss. 8, pp. 2682-2697
Closed Access | Times Cited: 34
Epigenetics, microbiota, and intraocular inflammation: New paradigms of immune regulation in the eye
Xiaofeng Wen, Xiao Hu, Miao Li, et al.
Progress in Retinal and Eye Research (2018) Vol. 64, pp. 84-95
Open Access | Times Cited: 53
Clostridioides difficile LuxS mediates inter-bacterial interactions within biofilms
Ross T. Slater, Lucy R. Frost, Siân E. Jossi, et al.
Scientific Reports (2019) Vol. 9, Iss. 1
Open Access | Times Cited: 50
Rahnella aquatilis VgrG-mediated PANoptosis in macrophages of Carassius auratus by dual RNA-seq analysis
Xiaoran Liu, Yanyan Cao, Xiucai Hu, et al.
Fish & Shellfish Immunology (2025), pp. 110155-110155
Closed Access
Dual RNA-Seq Analysis of Trichophyton rubrum and HaCat Keratinocyte Co-Culture Highlights Important Genes for Fungal-Host Interaction
Monise Fazolin Petrucelli, Kamila Chagas Peronni, Pablo Rodrigo Sanches, et al.
Genes (2018) Vol. 9, Iss. 7, pp. 362-362
Open Access | Times Cited: 34
Triple RNA-Seq Reveals Synergy in a Human Virus-Fungus Co-infection Model
Bastian Seelbinder, Julia Wallstabe, Lothar Marischen, et al.
Cell Reports (2020) Vol. 33, Iss. 7, pp. 108389-108389
Open Access | Times Cited: 32
Soil microbiota influences clubroot disease by modulatingPlasmodiophora brassicaeandBrassica napustranscriptomes
Stéphanie Daval, Kévin Gazengel, Arnaud Belcour, et al.
Microbial Biotechnology (2020) Vol. 13, Iss. 5, pp. 1648-1672
Open Access | Times Cited: 29
Pneumolysin promotes host cell necroptosis and bacterial competence during pneumococcal meningitis as shown by whole-animal dual RNA-seq
Kin Ki Jim, Rieza Aprianto, Rutger Koning, et al.
Cell Reports (2022) Vol. 41, Iss. 12, pp. 111851-111851
Open Access | Times Cited: 16
Concept of microbial gatekeepers: Positive guys?
Wenfang Dai, Jiong Chen, Jinbo Xiong
Applied Microbiology and Biotechnology (2018) Vol. 103, Iss. 2, pp. 633-641
Closed Access | Times Cited: 30
Investigations of the mechanisms of interactions between four non-conventional species with Saccharomyces cerevisiae in oenological conditions
Olivier Harlé, Judith Legrand, Catherine Tesnière, et al.
PLoS ONE (2020) Vol. 15, Iss. 5, pp. e0233285-e0233285
Open Access | Times Cited: 27
In vivo dual RNA-seq reveals that neutrophil recruitment underlies differential tissue tropism of Streptococcus pneumoniae
Vikrant Minhas, Rieza Aprianto, Lauren J. McAllister, et al.
Communications Biology (2020) Vol. 3, Iss. 1
Open Access | Times Cited: 26
New Pathogenesis Mechanisms and Translational Leads Identified by Multidimensional Analysis of Necrotizing Myositis in Primates
Priyanka Kachroo, Jesus M. Eraso, Randall J. Olsen, et al.
mBio (2020) Vol. 11, Iss. 1
Open Access | Times Cited: 24
A perspective on insect–microbe holobionts facing thermal fluctuations in a climate‐change context
Corentin Iltis, Kévin Tougeron, Thierry Hance, et al.
Environmental Microbiology (2021) Vol. 24, Iss. 1, pp. 18-29
Closed Access | Times Cited: 19
Transcription Profiling Reveals Cooperative Metabolic Interactions in a Microbial Cheese-Ripening Community Composed of Debaryomyces hansenii, Brevibacterium aurantiacum, and Hafnia alvei
Nguyen-Phuong Pham, Sophie Landaud, Pascale Lieben, et al.
Frontiers in Microbiology (2019) Vol. 10
Open Access | Times Cited: 21
Omics and interspecies interaction
Bhumika Shokeen, Márcia Dinis, Farnoosh Haghighi, et al.
Periodontology 2000 (2020) Vol. 85, Iss. 1, pp. 101-111
Closed Access | Times Cited: 19
Lineage-Specific Rewiring of Core Pathways Predating Innovation of Legume Nodules Shapes Symbiotic Efficiency
Wen-Jing Cui, Biliang Zhang, Ran Zhao, et al.
mSystems (2021) Vol. 6, Iss. 2
Open Access | Times Cited: 15
CROSSMAPPER: estimating cross-mapping rates and optimizing experimental design in multi-species sequencing studies
Hrant Hovhannisyan, Ahmed Ibrahem Hafez, Carlos Lloréns, et al.
Bioinformatics (2019) Vol. 36, Iss. 3, pp. 925-927
Open Access | Times Cited: 17
DualSeqDB: the host–pathogen dual RNA sequencing database for infection processes
Javier Macho Rendón, Benjamin Lang, Marc Ramos-Llorens, et al.
Nucleic Acids Research (2020) Vol. 49, Iss. D1, pp. D687-D693
Open Access | Times Cited: 15
Transcriptome Analyses of Barley Roots Inoculated with Novel Paenibacillus sp. and Erwinia gerundensis Strains Reveal Beneficial Early-Stage Plant–Bacteria Interactions
Tongda Li, Ross Mann, Jatinder Kaur, et al.
Plants (2021) Vol. 10, Iss. 9, pp. 1802-1802
Open Access | Times Cited: 14
Differing Responses to Phytophthora cinnamomi Infection in Susceptible and Partially Resistant Persea americana (Mill.) Rootstocks: A Case for the Role of Receptor-Like Kinases and Apoplastic Proteases
Robert Backer, Juanita Engelbrecht, Noëlani van den Berg
Frontiers in Plant Science (2022) Vol. 13
Open Access | Times Cited: 9
Organism dual RNA‐seq reveals the importance of BarA/UvrY inVibrio parahaemolyticusvirulence
Wenwen Zhang, Ruiqiang Xie, Xiaohua Douglas Zhang, et al.
The FASEB Journal (2020) Vol. 34, Iss. 6, pp. 7561-7577
Closed Access | Times Cited: 13
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