OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

MSFragger-Labile: A Flexible Method to Improve Labile PTM Analysis in Proteomics
Daniel A. Polasky, Daniel Geiszler, Fengchao Yu, et al.
Molecular & Cellular Proteomics (2023) Vol. 22, Iss. 5, pp. 100538-100538
Open Access | Times Cited: 26

Showing 1-25 of 26 citing articles:

diaTracer enables spectrum-centric analysis of diaPASEF proteomics data
Kai Li, Guo Ci Teo, Kevin Yang, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 3

Cu-Catalyzed Azide–Alkyne–Thiol Reaction Forms Ubiquitous Background in Chemical Proteomic Studies
Andreas Wiest, Pavel Kielkowski
Journal of the American Chemical Society (2024) Vol. 146, Iss. 3, pp. 2151-2159
Open Access | Times Cited: 9

Quantitative proteome-wide O-glycoproteomics analysis with FragPipe
Daniel A. Polasky, Lei Lü, Fengchao Yu, et al.
Analytical and Bioanalytical Chemistry (2024)
Open Access | Times Cited: 4

Solid-Phase Compatible Silane-Based Cleavable Linker Enables Custom Isobaric Quantitative Chemoproteomics
Nikolas R. Burton, Daniel A. Polasky, Flowreen Shikwana, et al.
Journal of the American Chemical Society (2023) Vol. 145, Iss. 39, pp. 21303-21318
Closed Access | Times Cited: 10

AMPylation regulates PLD3 processing.
Lutz Hoffmann, Eva-Maria Eckl, Marleen Bérouti, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access

MSFragger-DDA+ enhances peptide identification sensitivity with full isolation window search
Fengchao Yu, Yamei Deng, Alexey I. Nesvizhskii
Nature Communications (2025) Vol. 16, Iss. 1
Open Access

Protein painting for structural and binding site analysis via intracellular lysine reactivity profiling with o-phthalaldehyde
Zhenxiang Zheng, Ya Zeng, Kunjia Lai, et al.
Chemical Science (2024) Vol. 15, Iss. 16, pp. 6064-6075
Open Access | Times Cited: 3

diaTracer enables spectrum-centric analysis of diaPASEF proteomics data
Kai Li, Guo Ci Teo, Kevin Yang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3

A learned score function improves the power of mass spectrometry database search
Varun Ananth, Justin J. Sanders, Melih Yilmaz, et al.
Bioinformatics (2024) Vol. 40, Iss. Supplement_1, pp. i410-i417
Open Access | Times Cited: 2

MSFragger-DDA+ Enhances Peptide Identification Sensitivity with Full Isolation Window Search
Fengchao Yu, Yamei Deng, Alexey I. Nesvizhskii
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2

Unbiased Phosphoproteome Mining Reveals New Functional Sites of Metabolite-Derived PTMs Involved in MASLD Development
Eduardo Moltó, Cristina Pintado, Ruy A. Louzada, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 22, pp. 16172-16172
Open Access | Times Cited: 4

Spectra without stories: reporting 94% dark and unidentified ancient proteomes
Yun Chiang, Frido Welker, Matthew J. Collins
Open Research Europe (2024) Vol. 4, pp. 71-71
Open Access | Times Cited: 1

O-linked glycosylations in human milk casein and major whey proteins during lactation
Martin Nørmark Thesbjerg, Katrine Overgaard Poulsen, Julie Astono, et al.
International Journal of Biological Macromolecules (2024) Vol. 267, pp. 131613-131613
Open Access | Times Cited: 1

Electron Capture vs Transfer Dissociation for Site Determination of Tryptic Peptide Tyrosine Sulfation: Direct Detection of Fibrinogen Sulfation Sites and Identification of Novel Isobaric Interferences
Menatallah M. Youssef, Carson W. Szot, Jeff Folz, et al.
Journal of Proteome Research (2024) Vol. 23, Iss. 7, pp. 2386-2396
Closed Access | Times Cited: 1

Proceedings of the EuBIC-MS developers meeting 2023
Pedro Beltrao, Tim Van Den Bossche, Ralf Gabriels, et al.
Journal of Proteomics (2024) Vol. 305, pp. 105246-105246
Open Access | Times Cited: 1

Chemical crosslinking extends and complements UV crosslinking in analysis of RNA/DNA nucleic acid-protein interaction sites by mass spectrometry
Luisa M. Welp, Timo Sachsenberg, Alexander Wulf, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Closed Access | Times Cited: 1

DIA-based phosphoproteomics profiling reveals rapid cold-responsive phosphorylation events in tomato fruit
Jinjuan Tan, Hanqian Feng, Zhiping Deng
Postharvest Biology and Technology (2024) Vol. 219, pp. 113207-113207
Closed Access | Times Cited: 1

Protein “purity,” proteoforms, and the albuminome: critical observations on proteome and systems complexity
Breyer Woodland, Jens R. Coorssen, Matthew P. Padula
Frontiers in Cell and Developmental Biology (2024) Vol. 12
Open Access | Times Cited: 1

Data mining antibody sequences for database searching in bottom-up proteomics
Tung X. Trinh, Rebecca Freitag, Konrad Krawczyk, et al.
ImmunoInformatics (2024) Vol. 15, pp. 100042-100042
Open Access

Improved deconvolution of natural products’ protein targets using diagnostic ions from chemical proteomics linkers
Andreas Wiest, Pavel Kielkowski
Beilstein Journal of Organic Chemistry (2024) Vol. 20, pp. 2323-2341
Open Access

Investigation and Development of the BODIPY-Embedded Isotopic Signature for Chemoproteomics Labeling and Targeted Profiling
Rachel Joshi, Adam M. Hawkridge
Journal of the American Society for Mass Spectrometry (2024) Vol. 35, Iss. 10, pp. 2440-2447
Open Access

Mass Spectrometric Evidence for the Under-represented RNA–Protein Cross-Links
Jong Woo Bae
ACS Omega (2024) Vol. 9, Iss. 40, pp. 41863-41866
Open Access

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