OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

A “Fuzzy”-Logic Language for Encoding Multiple Physical Traits in Biomolecules
Shira Warszawski, Ravit Netzer, Dan S. Tawfik, et al.
Journal of Molecular Biology (2014) Vol. 426, Iss. 24, pp. 4125-4138
Open Access | Times Cited: 26

Showing 1-25 of 26 citing articles:

Principles of Protein Stability and Their Application in Computational Design
Adi Goldenzweig, Sarel J. Fleishman
Annual Review of Biochemistry (2018) Vol. 87, Iss. 1, pp. 105-129
Open Access | Times Cited: 244

Principles for computational design of binding antibodies
Dror Baran, M. Gabriele Pszolla, Gideon Lapidoth, et al.
Proceedings of the National Academy of Sciences (2017) Vol. 114, Iss. 41, pp. 10900-10905
Open Access | Times Cited: 125

Protein engineers turned evolutionists—the quest for the optimal starting point
Devin L. Trudeau, Dan S. Tawfik
Current Opinion in Biotechnology (2019) Vol. 60, pp. 46-52
Open Access | Times Cited: 115

Third generation antibody discovery methods:in silicorational design
Pietro Sormanni, Francesco A. Aprile, Michele Vendruscolo
Chemical Society Reviews (2018) Vol. 47, Iss. 24, pp. 9137-9157
Closed Access | Times Cited: 111

The Moderately Efficient Enzyme: Futile Encounters and Enzyme Floppiness
Arren Bar‐Even, Ron Milo, Elad Noor, et al.
Biochemistry (2015) Vol. 54, Iss. 32, pp. 4969-4977
Closed Access | Times Cited: 101

AbDesign: An algorithm for combinatorial backbone design guided by natural conformations and sequences
Gideon Lapidoth, Dror Baran, Gabriele M. Pszolla, et al.
Proteins Structure Function and Bioinformatics (2015) Vol. 83, Iss. 8, pp. 1385-1406
Open Access | Times Cited: 95

Design of stimulus-responsive two-state hinge proteins
Florian Praetorius, Philip J. Y. Leung, Maxx H. Tessmer, et al.
Science (2023) Vol. 381, Iss. 6659, pp. 754-760
Open Access | Times Cited: 37

Modeling Immunity with Rosetta: Methods for Antibody and Antigen Design
Clara T. Schoeder, Samuel Schmitz, Jared Adolf‐Bryfogle, et al.
Biochemistry (2021) Vol. 60, Iss. 11, pp. 825-846
Open Access | Times Cited: 45

De novo-designed transmembrane domains tune engineered receptor functions
Assaf Elazar, Nicholas J. Chandler, Ashleigh S Davey, et al.
eLife (2022) Vol. 11
Open Access | Times Cited: 36

A biophysical model of viral escape from polyclonal antibodies
Timothy C. Yu, Zorian Thornton, William W. Hannon, et al.
Virus Evolution (2022) Vol. 8, Iss. 2
Open Access | Times Cited: 30

LARGE SCALE ENERGY DECOMPOSITION FOR THE ANALYSIS OF PROTEIN STABILITY
Samman Mansoor, Elena Frasnetti, Ivan Cucchi, et al.
Cell Stress and Chaperones (2025)
Open Access

Ultrahigh specificity in a network of computationally designed protein-interaction pairs
Ravit Netzer, Dina Listov, Rosalie Lipsh‐Sokolik, et al.
Nature Communications (2018) Vol. 9, Iss. 1
Open Access | Times Cited: 52

Practically useful protein-design methods combining phylogenetic and atomistic calculations
Jonathan J. Weinstein, Olga Khersonsky, Sarel J. Fleishman
Current Opinion in Structural Biology (2020) Vol. 63, pp. 58-64
Open Access | Times Cited: 42

Assessing and enhancing foldability in designed proteins
Dina Listov, Rosalie Lipsh‐Sokolik, Stéphane Rosset, et al.
Protein Science (2022) Vol. 31, Iss. 9
Open Access | Times Cited: 18

Protein design: from computer models to artificial intelligence
Antonella Paladino, Filippo Marchetti, Silvia Rinaldi, et al.
Wiley Interdisciplinary Reviews Computational Molecular Science (2017) Vol. 7, Iss. 5
Closed Access | Times Cited: 28

The AbDesign computational pipeline for modular backbone assembly and design of binders and enzymes
Rosalie Lipsh‐Sokolik, Dina Listov, Sarel J. Fleishman
Protein Science (2020) Vol. 30, Iss. 1, pp. 151-159
Open Access | Times Cited: 21

Incorporating an allosteric regulatory site in an antibody through backbone design
Olga Khersonsky, Sarel J. Fleishman
Protein Science (2017) Vol. 26, Iss. 4, pp. 807-813
Open Access | Times Cited: 14

Inspired by nature
Ravit Netzer, Sarel J. Fleishman
Science (2016) Vol. 352, Iss. 6286, pp. 657-658
Open Access | Times Cited: 11

Searching for the Pareto frontier in multi-objective protein design
Vikas Nanda, Sandeep V. Belure, Ofer M. Shir
Biophysical Reviews (2017) Vol. 9, Iss. 4, pp. 339-344
Open Access | Times Cited: 6

Design of stimulus-responsive two-state hinge proteins
Florian Praetorius, Philip J. Y. Leung, Maxx H. Tessmer, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2

Evolutionary paths that link orthogonal pairs of binding proteins
Ziv Avizemer, Carlos Martí‐Gómez, Shlomo Yakir Hoch, et al.
Research Square (Research Square) (2023)
Open Access | Times Cited: 2

Protein design by multiobjective optimization
Sandeep V. Belure, Ofer M. Shir, Vikas Nanda
Proceedings of the Genetic and Evolutionary Computation Conference (2017), pp. 1081-1088
Open Access | Times Cited: 5

Obituary: Dan S Tawfik (1955–2021)
Amir Aharoni, Sarel J. Fleishman
FEBS Journal (2021) Vol. 288, Iss. 13, pp. 3880-3883
Open Access | Times Cited: 3

Assessing and enhancing foldability in designed proteins
Dina Listov, Rosalie Lipsh‐Sokolik, Stéphane Rosset, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 3

The Structural Basis of Protein Moonlighting
Brian E. Henderson, Mario A. Fares, Andrew C.R. Martin
(2016), pp. 45-61
Closed Access

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