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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Recent advances in T-cell receptor repertoire analysis: Bridging the gap with multimodal single-cell RNA sequencing
Sebastiaan Valkiers, Nicky de Vrij, Sofie Gielis, et al.
ImmunoInformatics (2022) Vol. 5, pp. 100009-100009
Open Access | Times Cited: 38

Showing 1-25 of 38 citing articles:

Can we predict T cell specificity with digital biology and machine learning?
D. R. Hudson, Ricardo A. Fernandes, Mark Basham, et al.
Nature reviews. Immunology (2023) Vol. 23, Iss. 8, pp. 511-521
Open Access | Times Cited: 118
Integrating single-cell multi-omics and prior biological knowledge for a functional characterization of the immune system
Philipp Schäfer, Daniel Dimitrov, Eduardo J. Villablanca, et al.
Nature Immunology (2024) Vol. 25, Iss. 3, pp. 405-417
Closed Access | Times Cited: 18
Evaluation of the TCR Repertoire as a Predictive and Prognostic Biomarker in Cancer: Diversity or Clonality?
Andrea Aran, Laia Garrigós, Giuseppe Curigliano, et al.
Cancers (2022) Vol. 14, Iss. 7, pp. 1771-1771
Open Access | Times Cited: 41
Adaptive immune receptor repertoire analysis
Vanessa Mhanna, Habib Bashour, Khang Lê Quý, et al.
Nature Reviews Methods Primers (2024) Vol. 4, Iss. 1
Closed Access | Times Cited: 12
Structure-based prediction of T cell receptor recognition of unseen epitopes using TCRen
В. К. Карнаухов, Dmitrii S. Shcherbinin, Anton O. Chugunov, et al.
Nature Computational Science (2024) Vol. 4, Iss. 7, pp. 510-521
Closed Access | Times Cited: 8
T-Cell Receptor Repertoire Sequencing and Its Applications: Focus on Infectious Diseases and Cancer
L. Mazzotti, Anna Gaimari, Sara Bravaccini, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 15, pp. 8590-8590
Open Access | Times Cited: 28
A comparison of clustering models for inference of T cell receptor antigen specificity
D. R. Hudson, Alexander L. R. Lubbock, Mark Basham, et al.
ImmunoInformatics (2024) Vol. 13, pp. 100033-100033
Open Access | Times Cited: 6
Quantitative approaches for decoding the specificity of the human T cell repertoire
Zahra S. Ghoreyshi, Jason T. George
Frontiers in Immunology (2023) Vol. 14
Open Access | Times Cited: 15
Machine Learning Approaches to TCR Repertoire Analysis
Yotaro Katayama, Ryo Yokota, Taishin Akiyama, et al.
Frontiers in Immunology (2022) Vol. 13
Open Access | Times Cited: 21
EPIC-TRACE: predicting TCR binding to unseen epitopes using attention and contextualized embeddings
Dani Korpela, Emmi Jokinen, Alexandru Dumitrescu, et al.
Bioinformatics (2023) Vol. 39, Iss. 12
Open Access | Times Cited: 12
Current annotation strategies for T cell phenotyping of single-cell RNA-seq data
Kerry A. Mullan, Nicky de Vrij, Sebastiaan Valkiers, et al.
Frontiers in Immunology (2023) Vol. 14
Open Access | Times Cited: 9
Unified cross-modality integration and analysis of T cell receptors and T cell transcriptomes by low-resource-aware representation learning
Yicheng Gao, Kejing Dong, Yuli Gao, et al.
Cell Genomics (2024) Vol. 4, Iss. 5, pp. 100553-100553
Open Access | Times Cited: 3
Limits on inferring T cell specificity from partial information
James Henderson, Yuta Nagano, Martina Milighetti, et al.
Proceedings of the National Academy of Sciences (2024) Vol. 121, Iss. 42
Open Access | Times Cited: 3
Inferring the T cell repertoire dynamics of healthy individuals
Meriem Bensouda Koraichi, S. Ferri, Aleksandra M. Walczak, et al.
Proceedings of the National Academy of Sciences (2023) Vol. 120, Iss. 4
Open Access | Times Cited: 5
Relevance of tissue-resident memory CD8 T cells in the onset of Parkinson’s disease and examination of its possible etiologies: infectious or autoimmune?
Oriol de Fàbregues, María Clara Sellés, David Ramos-Vicente, et al.
Neurobiology of Disease (2023) Vol. 187, pp. 106308-106308
Open Access | Times Cited: 5
Systems immunology spanning tumors, lymph nodes, and periphery
Dimitrios N. Sidiropoulos, Won Jin Ho, Elizabeth M. Jaffee, et al.
Cell Reports Methods (2023) Vol. 3, Iss. 12, pp. 100670-100670
Open Access | Times Cited: 5
Transcriptomic research in atherosclerosis: Unravelling plaque phenotype and overcoming methodological challenges
Miron Sopić, Kanita Karađuzović-Hadžiabdić, Dimitris Kardassis, et al.
Journal of Molecular and Cellular Cardiology Plus (2023) Vol. 6, pp. 100048-100048
Open Access | Times Cited: 4
Unraveling the intricacies of host-pathogen interaction through single-cell genomics
Emanuele Gioacchino, Koen Vandelannoote, Anthony A. Ruberto, et al.
Microbes and Infection (2024) Vol. 26, Iss. 7, pp. 105313-105313
Open Access | Times Cited: 1
TCRosetta: an integrated analysis and annotation platform for T-cell receptor sequences
Tao Yue, Si‐Yi Chen, Wen‐Kang Shen, et al.
Genomics Proteomics & Bioinformatics (2024) Vol. 22, Iss. 4
Open Access | Times Cited: 1
The T-cell repertoire of Spanish patients with COVID-19 as a strategy to link T-cell characteristics to the severity of the disease
Fernando Marín-Benesiu, Lucia Chica‐Redecillas, Verónica Arenas-Rodríguez, et al.
Human Genomics (2024) Vol. 18, Iss. 1
Open Access | Times Cited: 1
Potential of TCR sequencing in graft-versus-host disease
Manisha Goel, Anne Eugster, Johannes Schetelig, et al.
Bone Marrow Transplantation (2022) Vol. 58, Iss. 3, pp. 239-246
Open Access | Times Cited: 5
GENTLE: a novel bioinformatics tool for generating features and building classifiers from T cell repertoire cancer data
Dhiego Souto Andrade, Patrick Terrematte, César Rennó‐Costa, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 2
T cell receptor-centric perspective to multimodal single-cell data analysis
Kerry A. Mullan, My Kieu Ha, Sebastiaan Valkiers, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 2
Differential predictive value of resident memory CD8+T cell subpopulations in non-small-cell lung cancer patients treated by immunotherapy
Léa Paolini, Thi Tran, Stéphanie Corgnac, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Immunopipe: A comprehensive and flexible scRNA-seq and scTCR-seq data analysis pipeline
Panwen Wang, Yue Yu, Haidong Dong, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
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