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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

A Review of Machine Learning and Algorithmic Methods for Protein Phosphorylation Site Prediction
Farzaneh Esmaili, Mahdi Pourmirzaei, Shahin Ramazi, et al.
Genomics Proteomics & Bioinformatics (2023) Vol. 21, Iss. 6, pp. 1266-1285
Open Access | Times Cited: 17

Showing 17 citing articles:

Analysis and review of techniques and tools based on machine learning and deep learning for prediction of lysine malonylation sites in protein sequences
Shahin Ramazi, Seyed Amir Hossein Tabatabaei, Elham Khalili, et al.
Database (2024) Vol. 2024
Open Access | Times Cited: 5
MMFuncPhos: A Multi‐Modal Learning Framework for Identifying Functional Phosphorylation Sites and Their Regulatory Types
Juan Xie, Ruihan Dong, Jintao Zhu, et al.
Advanced Science (2025)
Open Access
Modern Approaches to Protein Constructions: A Comprehensive Review of Computational Tools and Databases for De Novo Protein Design and Engineering
Md. Mojnu Mia, Habiba Sultana, Md. Al Amin, et al.
Engineering Reports (2025) Vol. 7, Iss. 2
Open Access
Kinase-substrate prediction using an autoregressive model
Farzaneh Esmaili, Yongfang Qin, Duolin Wang, et al.
Computational and Structural Biotechnology Journal (2025) Vol. 27, pp. 1103-1111
Open Access
Inferring kinase–phosphosite regulation from phosphoproteome-enriched cancer multi-omics datasets
H Cheng, Zhuoran Liang, Yijin Wu, et al.
Briefings in Bioinformatics (2025) Vol. 26, Iss. 2
Open Access
Protein modification in neurodegenerative diseases
Shahin Ramazi, Maedeh Dadzadi, Mona Darvazi, et al.
MedComm (2024) Vol. 5, Iss. 8
Open Access | Times Cited: 4
The HABD: Home of All Biological Databases Empowering Biological Research With Cutting‐Edge Database Systems
Shahid Ullah, Wajeeha Rahman, Farhan Ullah, et al.
Current Protocols (2024) Vol. 4, Iss. 5
Closed Access | Times Cited: 2
Prot2Token: A multi-task framework for protein language processing using autoregressive language modeling
Mahdi Pourmirzaei, Farzaneh Esmaili, Mohammadreza Pourmirzaei, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Phosphorylation of mammalian cytosolic and mitochondrial malate dehydrogenase: insights into regulation
Joseph Provost, Kathleen Cornely, Pamela Mertz, et al.
Essays in Biochemistry (2024)
Closed Access | Times Cited: 2
Interaction of Soybean (Glycine max (L.) Merr.) Class II ACBPs with MPK2 and SAPK2 Kinases: New Insights into the Regulatory Mechanisms of Plant ACBPs
Atieh Moradi, Shiu‐Cheung Lung, Mee‐Len Chye
Plants (2024) Vol. 13, Iss. 8, pp. 1146-1146
Open Access | Times Cited: 1
Machine learning-based approaches for ubiquitination site prediction in human proteins
Mahdi Pourmirzaei, Shahin Ramazi, Farzaneh Esmaili, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 4
The expanding landscape of canonical and non-canonical protein phosphorylation
Thibault Houlès, Sang-Oh Yoon, Philippe P. Roux
Trends in Biochemical Sciences (2024) Vol. 49, Iss. 11, pp. 986-999
Closed Access | Times Cited: 1
Current computational tools for protein lysine acylation site prediction
Zhaohui Qin, Haoran Ren, Pei Zhao, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 6
Closed Access | Times Cited: 1
MehNet: a vigesimal-based model by amino acid melting points generates unique ID numbers for protein sequences
Mehmet Erten
Journal of Biomolecular Structure and Dynamics (2024), pp. 1-7
Closed Access
In Silico Analysis of the Missense Variants of Uncertain Significance of CTNNB1 Gene Reported in GnomAD Database
Arturo Caballero-Avendaño, Melva Gutiérrez‐Angulo, María de la Luz Ayala-Madrigal, et al.
Genes (2024) Vol. 15, Iss. 8, pp. 972-972
Open Access
Integrated Quantitative Proteomics and Phosphoproteomics Analysis Reveals the Dynamic Process of Buffalo (Bubalus bubalis) Spermatogenesis
Pengfei Zhang, Chenyang Wang, Xuyang Liu, et al.
Reproduction in Domestic Animals (2024) Vol. 59, Iss. 12
Closed Access
Data enhanced deep transfer learning for health state evaluation of cutting tools
Yiqun Dai, Yang Xie, Chaoyong Zhang
Nondestructive Testing And Evaluation (2024), pp. 1-19
Closed Access
PhosF3C: A Feature Fusion Architecture with Fine-Tuned Protein Language Model and Conformer for prediction of general phosphorylation site
Yuhuan Liu, Haitian Zhong, Junyu Zhai, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
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