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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Enhancer architecture and chromatin accessibility constrain phenotypic space during Drosophila development
Rafael Galupa, Gilberto Álvarez-Canales, Noa Ottilie Borst, et al.
Developmental Cell (2023) Vol. 58, Iss. 1, pp. 51-62.e4
Open Access | Times Cited: 33

Showing 1-25 of 33 citing articles:

Hold out the genome: a roadmap to solving the cis-regulatory code
Carl G. de Boer, Jussi Taipale
Nature (2023) Vol. 625, Iss. 7993, pp. 41-50
Open Access | Times Cited: 43
Synthetic reversed sequences reveal default genomic states
Brendan Camellato, Ran Brosh, Hannah J. Ashe, et al.
Nature (2024) Vol. 628, Iss. 8007, pp. 373-380
Open Access | Times Cited: 12
Regulatory activity is the default DNA state in eukaryotes
Ishika Luthra, Cassandra Jensen, Xinyi E. Chen, et al.
Nature Structural & Molecular Biology (2024) Vol. 31, Iss. 3, pp. 559-567
Closed Access | Times Cited: 11
Antagonizing cis- regulatory elements of a conserved flowering gene mediate developmental robustness
Amy Lanctot, Anat Hendelman, Peter Udilovich, et al.
Proceedings of the National Academy of Sciences (2025) Vol. 122, Iss. 8
Open Access | Times Cited: 1
Decoding enhancer complexity with machine learning and high-throughput discovery
Gabrielle D Smith, Wan Hern Ching, Paola Cornejo‐Páramo, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 18
Rewriting regulatory DNA to dissect and reprogram gene expression
Gabriella E. Martyn, Michael T. Montgomery, H. Spencer Jones, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 14
Enhancers display constrained sequence flexibility and context-specific modulation of motif function
Franziska Reiter, Bernardo P. de Almeida, Alexander Stark
Genome Research (2023) Vol. 33, Iss. 3, pp. 346-358
Open Access | Times Cited: 13
Spherical harmonics texture extraction for versatile analysis of biological objects
Oane Gros, Josiah B. Passmore, Noa Ottilie Borst, et al.
PLoS Computational Biology (2025) Vol. 21, Iss. 1, pp. e1012349-e1012349
Open Access
Ancient biases in phenotype production drove the functional evolution of a protein family
Santiago Herrera‐Álvarez, Jaeda Patton, Joseph W. Thornton
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Rewriting regulatory DNA to dissect and reprogram gene expression
Gabriella E. Martyn, Michael T. Montgomery, H. Spencer Jones, et al.
Cell (2025)
Open Access
Rapid response of fly populations to gene dosage across development and generations
Xueying Li, Lautaro Gándara, Måns Ekelöf, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 3
The emergence and evolution of gene expression in genome regions replete with regulatory motifs
Timothy Fuqua, Yiqiao Sun, Andreas Wagner
eLife (2024) Vol. 13
Open Access | Times Cited: 2
Novelty versus innovation of gene regulatory elements in human evolution and disease
Anushka Katikaneni, Craig B. Lowe
Current Opinion in Genetics & Development (2024) Vol. 90, pp. 102279-102279
Open Access | Times Cited: 2
Mutational scans reveal differential evolvability of Drosophila promoters and enhancers
Xueying Li, Timothy Fuqua, Maria Elize van Breugel, et al.
Philosophical Transactions of the Royal Society B Biological Sciences (2023) Vol. 378, Iss. 1877
Open Access | Times Cited: 6
Integrative approaches to study enhancer–promoter communication
Pia Mach, Luca Giorgetti
Current Opinion in Genetics & Development (2023) Vol. 80, pp. 102052-102052
Open Access | Times Cited: 5
From sequence to consequence: Deciphering the complex cis-regulatory landscape
Greg Jude Dsilva, Sanjeev Galande
Journal of Biosciences (2024) Vol. 49, Iss. 2
Closed Access | Times Cited: 1
Shaping gene expression and its evolution by chromatin architecture and enhancer activity
Jorge Mañes-García, Raquel Marco-Ferreres, Leonardo Beccari
Current topics in developmental biology/Current Topics in Developmental Biology (2024), pp. 406-437
Closed Access | Times Cited: 1
Chromatin enables precise and scalable gene regulation with factors of limited specificity
Melinda Liu Perkins, Justin Crocker, Gašper Tkačik
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Beyond modular enhancers: new questions in cis-regulatory evolution
Jeanne M.C. McDonald, Robert D. Reed
Trends in Ecology & Evolution (2024)
Closed Access | Times Cited: 1
Functional analysis of the Drosophila eve locus in response to non-canonical combinations of gap gene expression levels
Netta Haroush, Michal Levo, Eric Wieschaus, et al.
Developmental Cell (2023) Vol. 58, Iss. 23, pp. 2789-2801.e5
Open Access | Times Cited: 2
The emergence and evolution of gene expression in genome regions replete with regulatory motifs
Timothy Fuqua, Yiqiao Sun, Andreas Wagner
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Spherical harmonics texture extraction for versatile analysis of biological objects
Oane J. Gros, Josiah B. Passmore, Noa Ottilie Borst, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
TF-High-Evolutionary: in vivo mutagenesis of gene regulatory networks for the study of the genetics and evolution of the Drosophila regulatory genome
Xueying Li, Vani Srinivasan, Ian Laiker, et al.
Molecular Biology and Evolution (2024) Vol. 41, Iss. 8
Open Access
Chromatin enables precise and scalable gene regulation with factors of limited specificity
Melinda Liu Perkins, Justin Crocker, Gašper Tkačik
Proceedings of the National Academy of Sciences (2024) Vol. 122, Iss. 1
Open Access
Reviewer #2 (Public Review): The emergence and evolution of gene expression in genome regions replete with regulatory motifs

(2024)
Open Access
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