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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

A new age in protein design empowered by deep learning
Hamed Khakzad, Ilia Igashov, Arne Schneuing, et al.
Cell Systems (2023) Vol. 14, Iss. 11, pp. 925-939
Open Access | Times Cited: 46

Showing 1-25 of 46 citing articles:

Past, present, and future of CRISPR genome editing technologies
Martin Pacesa, Oana Pelea, Martin Jínek
Cell (2024) Vol. 187, Iss. 5, pp. 1076-1100
Open Access | Times Cited: 119
Sparks of function by de novo protein design
Alexander E. Chu, Tianyu Lu, Po‐Ssu Huang
Nature Biotechnology (2024) Vol. 42, Iss. 2, pp. 203-215
Closed Access | Times Cited: 30
Targeting protein–ligand neosurfaces with a generalizable deep learning tool
Anthony Marchand, Stephen Buckley, Arne Schneuing, et al.
Nature (2025)
Open Access | Times Cited: 3
Molecular determinants of condensate composition
Alex S. Holehouse, Simon Alberti
Molecular Cell (2025) Vol. 85, Iss. 2, pp. 290-308
Open Access | Times Cited: 3
Recent Advances in Machine Learning‐Assisted Multiscale Design of Energy Materials
Bohayra Mortazavi
Advanced Energy Materials (2024)
Open Access | Times Cited: 12
Transferable deep generative modeling of intrinsically disordered protein conformations
Giacomo Janson, Michael Feig
PLoS Computational Biology (2024) Vol. 20, Iss. 5, pp. e1012144-e1012144
Open Access | Times Cited: 11
CodonTransformer: a multispecies codon optimizer using context-aware neural networks
Adibvafa Fallahpour, Vincent Gureghian, Guillaume J. Filion, et al.
Nature Communications (2025) Vol. 16, Iss. 1
Open Access | Times Cited: 1
Context-aware geometric deep learning for protein sequence design
Lucien F. Krapp, Fernando A. Meireles, Luciano A. Abriata, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 7
Structure-based drug design with equivariant diffusion models
Arne Schneuing, Charles B. Harris, Yuanqi Du, et al.
Nature Computational Science (2024)
Open Access | Times Cited: 7
Peptides and metal ions: A successful marriage for developing artificial metalloproteins
Linda Leone, Maria De Fenza, Alessandra Esposito, et al.
Journal of Peptide Science (2024)
Closed Access | Times Cited: 5
ProtMamba: a homology-aware but alignment-free protein state space model
Damiano Sgarbossa, Cyril Malbranke, Anne‐Florence Bitbol
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 5
From bench to bedside: cutting-edge applications of base editing and prime editing in precision medicine
Weihui Xu, Shiyao Zhang, Huan Qin, et al.
Journal of Translational Medicine (2024) Vol. 22, Iss. 1
Open Access | Times Cited: 5
Deep Learning Approaches for the Prediction of Protein Functional Sites
Borja Pitarch, Florencio Pazos
Molecules (2025) Vol. 30, Iss. 2, pp. 214-214
Open Access
High-Temperature Catalytic Platform Powered by Thermophilic Microorganisms and Thermozymes
Jiawei Li, Lichao Sun, Yi‐Xin Huo
Synthetic biology and engineering (2025) Vol. 3, Iss. 1, pp. 10001-10001
Closed Access
Ligand-Induced Biased Activation of GPCRs: Recent Advances and New Directions from In Silico Approaches
Shaima Hashem, Alexis Dougha, Pierre Tufféry
Molecules (2025) Vol. 30, Iss. 5, pp. 1047-1047
Open Access
Quantum‐Classical Simulation of Quantum Field Theory by Quantum Circuit Learning
Kazuki Ikeda
Annalen der Physik (2025)
Open Access
Enzymatic depolymerization of polyamides (nylons): current challenges and future directions
Shengwei Sun
Polymer Degradation and Stability (2025), pp. 111341-111341
Open Access
Diffusion Models and Generative Artificial Intelligence: Frameworks, Applications and Challenges
Pranjal Kumar
Archives of Computational Methods in Engineering (2025)
Closed Access
Transferable deep generative modeling of intrinsically disordered protein conformations
Giacomo Janson, Michael Feig
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
Revolutionizing Molecular Design for Innovative Therapeutic Applications through Artificial Intelligence
Ahrum Son, Jongham Park, Woojin Kim, et al.
Molecules (2024) Vol. 29, Iss. 19, pp. 4626-4626
Open Access | Times Cited: 4
Confinement and Catalysis within De Novo Designed Peptide Barrels
Rokas Petrenas, Olivia A. Hawkins, Jacob Jones, et al.
Journal of the American Chemical Society (2025)
Open Access
Exploring plant protein functions through structure-based clustering
Minlan Yu, Jie Wu, Cuihuan Zhao, et al.
Trends in Plant Science (2025)
Closed Access
IMPROVING ALPHAFOLD2 PERFORMANCE WITH A GLOBAL METAGENOMIC & BIOLOGICAL DATA SUPPLY CHAIN
Geraldene Munsamy, Tanggis Bohnuud, P. Lorenz
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3
Click, Compute, Create: A Review of Web‐based Tools for Enzyme Engineering
Adrian Tripp, Markus Braun, Florian Wieser, et al.
ChemBioChem (2024)
Open Access | Times Cited: 3
Using machine learning to enhance and accelerate synthetic biology
Kshitij Rai, Yiduo Wang, Ronan W. O’Connell, et al.
Current Opinion in Biomedical Engineering (2024) Vol. 31, pp. 100553-100553
Closed Access | Times Cited: 3
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