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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

BioAutoMATED: An end-to-end automated machine learning tool for explanation and design of biological sequences
Jacqueline A. Valeri, Luis R. Soenksen, Katherine M. Collins, et al.
Cell Systems (2023) Vol. 14, Iss. 6, pp. 525-542.e9
Open Access | Times Cited: 21

Showing 21 citing articles:

Machine learning for antimicrobial peptide identification and design
Fangping Wan, Felix Wong, James J. Collins, et al.
Nature Reviews Bioengineering (2024) Vol. 2, Iss. 5, pp. 392-407
Closed Access | Times Cited: 41
Automated data processing and feature engineering for deep learning and big data applications: A survey
Alhassan Mumuni, Fuseini Mumuni
Journal of Information and Intelligence (2024)
Open Access | Times Cited: 32
Applying interpretable machine learning in computational biology—pitfalls, recommendations and opportunities for new developments
Valerie Chen, Muyu Yang, Wenbo Cui, et al.
Nature Methods (2024) Vol. 21, Iss. 8, pp. 1454-1461
Closed Access | Times Cited: 11
GPro: generative AI-empowered toolkit for promoter design
Haochen Wang, Qixiu Du, Ye Wang, et al.
Bioinformatics (2024) Vol. 40, Iss. 3
Open Access | Times Cited: 5
Physicians should build their own machine-learning models
Yosra Magdi Mekki
Patterns (2024) Vol. 5, Iss. 3, pp. 100948-100948
Open Access | Times Cited: 4
Machine learning for synthetic gene circuit engineering
Sebastian Palacios, James J. Collins, Domitilla Del Vecchio
Current Opinion in Biotechnology (2025) Vol. 92, pp. 103263-103263
Closed Access
Advancing cell therapies with artificial intelligence and synthetic biology
Monojit Choudhury, Annika J. Deans, Daniel R. Candland, et al.
Current Opinion in Biomedical Engineering (2025), pp. 100580-100580
Open Access
Exploring Structure—Function Relationships in Engineered Receptor Performance Using Computational Structure Prediction
William K. Corcoran, Amparo Cosio, Hailey I. Edelstein, et al.
GEN Biotechnology (2025) Vol. 4, Iss. 1, pp. 37-55
Closed Access
AI in SERS sensing moving from discriminative to generative
Steven M. Quarin, Der Vang, Ruxandra I. Dima, et al.
Deleted Journal (2025) Vol. 2, Iss. 1
Open Access
SeqNAS: Neural Architecture Search for Event Sequence Classification
Igor P. Udovichenko, Egor Shvetsov, Denis Divitsky, et al.
IEEE Access (2024) Vol. 12, pp. 3898-3909
Open Access | Times Cited: 2
Our common home: artificial intelligence + global public health ecosystem
Dominique Monlezun
Elsevier eBooks (2024), pp. 215-243
Closed Access | Times Cited: 2
Generative and predictive neural networks for the design of functional RNA molecules
Aidan T. Riley, James Robson, Alexander A. Green
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 5
Hierarchical optimization of biochemical networks
Nisha A. Viswan, Alexandre Tribut, M. D. Gasparyan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Current computational tools for protein lysine acylation site prediction
Zhaohui Qin, Haoran Ren, Pei Zhao, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 6
Closed Access | Times Cited: 1
Exploring structure-function relationships in engineered receptor performance using computational structure prediction
William K. Corcoran, Amparo Cosio, Hailey I. Edelstein, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Automated characterization and analysis of expression compatibility between regulatory sequences and metabolic genes in Escherichia coli
Wen Xiao, Jia‐Wei Lin, Chunhe Yang, et al.
Synthetic and Systems Biotechnology (2024) Vol. 9, Iss. 4, pp. 647-657
Open Access
Semantically Rich Local Dataset Generation for Explainable AI in Genomics
Pedro Barbosa, Rosina Savisaar, Alcides Fonseca
Proceedings of the Genetic and Evolutionary Computation Conference (2024), pp. 267-276
Open Access
Bioconvergence: Bridging Science and Nature to Shape Tomorrow
Nina Siragusa, Laura Matz
(2024), pp. 1-24
Closed Access
Mathematical basis and toolchain for hierarchical optimization of biochemical networks
Nisha A. Viswan, Alexandre Tribut, M. D. Gasparyan, et al.
PLoS Computational Biology (2024) Vol. 20, Iss. 12, pp. e1012624-e1012624
Open Access
Synthetic translational coupling system for accurate and predictable polycistronic gene expression control in bacteria
Yong Hee Han, Hyeon Jin Kim, Keonwoo Kim, et al.
Metabolic Engineering (2024)
Closed Access
Leveraging Large Language Models for Metagenomic Analysis
Mohammad S. Refahi, Bahrad A. Sokhansanj, Gail Rosen
(2023), pp. 1-6
Closed Access
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