OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Sparse dictionary learning recovers pleiotropy from human cell fitness screens
Joshua Pan, Jason J. Kwon, Jessica A. Talamas, et al.
Cell Systems (2022) Vol. 13, Iss. 4, pp. 286-303.e10
Open Access | Times Cited: 25

Showing 25 citing articles:

Mapping information-rich genotype-phenotype landscapes with genome-scale Perturb-seq
Joseph M. Replogle, Reuben A. Saunders, Angela N. Pogson, et al.
Cell (2022) Vol. 185, Iss. 14, pp. 2559-2575.e28
Open Access | Times Cited: 334

The phenotypic landscape of essential human genes
Luke Funk, Kuan-Chung Su, Jimmy Ly, et al.
Cell (2022) Vol. 185, Iss. 24, pp. 4634-4653.e22
Open Access | Times Cited: 109

Integrator endonuclease drives promoter-proximal termination at all RNA polymerase II-transcribed loci
Chad B. Stein, Andrew R. Field, Claudia A. Mimoso, et al.
Molecular Cell (2022) Vol. 82, Iss. 22, pp. 4232-4245.e11
Open Access | Times Cited: 85

Integrator is a global promoter-proximal termination complex
Eric J. Wagner, Liang Tong, Karen Adelman
Molecular Cell (2023) Vol. 83, Iss. 3, pp. 416-427
Open Access | Times Cited: 76

Phosphate dysregulation via the XPR1–KIDINS220 protein complex is a therapeutic vulnerability in ovarian cancer
Daniel P. Bondeson, Brenton R. Paolella, Adhana Asfaw, et al.
Nature Cancer (2022) Vol. 3, Iss. 6, pp. 681-695
Open Access | Times Cited: 47

A combinatorial approach to uncover an additional Integrator subunit
Sarah Offley, Moritz M. Pfleiderer, Avery Zucco, et al.
Cell Reports (2023) Vol. 42, Iss. 3, pp. 112244-112244
Open Access | Times Cited: 23

Contextual AI models for single-cell protein biology
Michelle M. Li, Yepeng Huang, Marissa Sumathipala, et al.
Nature Methods (2024) Vol. 21, Iss. 8, pp. 1546-1557
Open Access | Times Cited: 14

Structural basis of the Integrator complex assembly and association with transcription factors
Michał Rażew, Angélique Fraudeau, Moritz M. Pfleiderer, et al.
Molecular Cell (2024) Vol. 84, Iss. 13, pp. 2542-2552.e5
Open Access | Times Cited: 10

A multi-scale map of protein assemblies in the DNA damage response
Anton Kratz, Minkyu Kim, Marcus R. Kelly, et al.
Cell Systems (2023) Vol. 14, Iss. 6, pp. 447-463.e8
Open Access | Times Cited: 19

On knowing a gene: A distributional hypothesis of gene function
Jason J. Kwon, Joshua Pan, Guadalupe Gonzalez, et al.
Cell Systems (2024) Vol. 15, Iss. 6, pp. 488-496
Open Access | Times Cited: 6

Mechanistic basis of gene-specific transcription regulation by the Integrator complex
Kevin Sabath, Amena Nabih, Christian Arnold, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4

The present and future of the Cancer Dependency Map
Rand Arafeh, Tsukasa Shibue, Joshua M. Dempster, et al.
Nature reviews. Cancer (2024)
Closed Access | Times Cited: 4

Inferring sparse structure in genotype–phenotype maps
Samantha Petti, Gautam Reddy, Michael M. Desai
Genetics (2023) Vol. 225, Iss. 1
Open Access | Times Cited: 11

Context-defined cancer co-dependency mapping identifies a functional interplay between PRC2 and MLL-MEN1 complex in lymphoma
Xiao Chen, Yinglu Li, Fang Zhu, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 10

Contextual AI models for single-cell protein biology
Michelle M. Li, Yepeng Huang, Marissa Sumathipala, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8

Structural basis of the Integrator complex assembly and association with transcription factors
Michał Rażew, Angélique Fraudeau, Moritz M. Pfleiderer, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2

Combinatorial prediction of therapeutic perturbations using causally-inspired neural networks
Guadalupe Gonzalez, Xiang Lin, Isuru Sachitha Herath, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1

Dimensionality reduction methods for extracting functional networks from large‐scale CRISPR screens
Arshia Zernab Hassan, Henry N. Ward, Mahfuzur Rahman, et al.
Molecular Systems Biology (2023) Vol. 19, Iss. 11
Open Access | Times Cited: 3

Optimal construction of a functional interaction network from pooled library CRISPR fitness screens
Veronica Gheorghe, Traver Hart
BMC Bioinformatics (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 4

Predicting potential target genes in molecular biology experiments using machine learning and multifaceted data sources
Kei Ito, Yoshimasa Tsuruoka, Daiju Kitagawa
iScience (2024) Vol. 27, Iss. 3, pp. 109309-109309
Open Access

BaCoN (Balanced Correlation Network) improves prediction of gene buffering
Thomas D. Rohde, Talip Yasir Demirtas, Angela Helen Shaw, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Closed Access

Contextual AI models for context-specific prediction in biology

Nature Methods (2024) Vol. 21, Iss. 8, pp. 1420-1421
Closed Access

Evaluation of input data modality choices on functional gene embeddings
Felix Brechtmann, Thibault Bechtler, Shubhankar Londhe, et al.
NAR Genomics and Bioinformatics (2023) Vol. 5, Iss. 4
Open Access | Times Cited: 1

Optimal construction of a functional interaction network from pooled library CRISPR fitness screens
Veronica Gheorghe, Traver Hart
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 2

Inferring sparse structure in genotype-phenotype maps
Samantha Petti, Gautam Reddy, Michael M. Desai
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access

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