OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Predicting and interpreting large-scale mutagenesis data using analyses of protein stability and conservation
Magnus Haraldson Høie, Matteo Cagiada, Anders Haagen Beck Frederiksen, et al.
Cell Reports (2022) Vol. 38, Iss. 2, pp. 110207-110207
Open Access | Times Cited: 107

Showing 1-25 of 107 citing articles:

Accurate proteome-wide missense variant effect prediction with AlphaMissense
Jun Cheng, Guido Novati, Joshua Pan, et al.
Science (2023) Vol. 381, Iss. 6664
Open Access | Times Cited: 806

A structural biology community assessment of AlphaFold2 applications
Mehmet Akdel, Douglas E. V. Pires, Eduard Porta‐Pardo, et al.
Nature Structural & Molecular Biology (2022) Vol. 29, Iss. 11, pp. 1056-1067
Open Access | Times Cited: 460

State-of-the-Art Estimation of Protein Model Accuracy Using AlphaFold
James P. Roney, Sergey Ovchinnikov
Physical Review Letters (2022) Vol. 129, Iss. 23
Open Access | Times Cited: 171

Mega-scale experimental analysis of protein folding stability in biology and design
Kotaro Tsuboyama, Justas Dauparas, Jonathan H. Chen, et al.
Nature (2023) Vol. 620, Iss. 7973, pp. 434-444
Open Access | Times Cited: 171

Incomplete Penetrance and Variable Expressivity: From Clinical Studies to Population Cohorts
Rebecca Kingdom, Caroline F. Wright
Frontiers in Genetics (2022) Vol. 13
Open Access | Times Cited: 140

Rapid protein stability prediction using deep learning representations
Lasse M. Blaabjerg, Maher M. Kassem, Lydia L. Good, et al.
eLife (2023) Vol. 12
Open Access | Times Cited: 101

Machine Learning-Guided Protein Engineering
Petr Kouba, Pavel Kohout, Faraneh Haddadi, et al.
ACS Catalysis (2023) Vol. 13, Iss. 21, pp. 13863-13895
Open Access | Times Cited: 86

Discovering functionally important sites in proteins
Matteo Cagiada, Sandro Bottaro, Søren Lindemose, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 49

A mutational atlas for Parkin proteostasis
Lene Clausen, Vasileios Voutsinos, Matteo Cagiada, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 20

Site-saturation mutagenesis of 500 human protein domains
Antoni Beltran, Xuege Jiang, Yue Shen, et al.
Nature (2025)
Open Access | Times Cited: 4

RosettaDDGPrediction for high‐throughput mutational scans: From stability to binding
Valentina Sora, Adrian Otamendi Laspiur, Kristine Degn, et al.
Protein Science (2022) Vol. 32, Iss. 1
Open Access | Times Cited: 40

State-of-the-art estimation of protein model accuracy using AlphaFold
James P. Roney, Sergey Ovchinnikov
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 38

Using machine learning to predict the effects and consequences of mutations in proteins
Daniel J. Diaz, Anastasiya V. Kulikova, Andrew D. Ellington, et al.
Current Opinion in Structural Biology (2023) Vol. 78, pp. 102518-102518
Open Access | Times Cited: 38

Biophysics-based protein language models for protein engineering
Sam Gelman, Bryce Johnson, Chase R. Freschlin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 11

Potts Hamiltonian Models and Molecular Dynamics Free Energy Simulations for Predicting the Impact of Mutations on Protein Kinase Stability
Abhishek Thakur, Joan Gizzio, Ronald M. Levy
The Journal of Physical Chemistry B (2024) Vol. 128, Iss. 7, pp. 1656-1667
Open Access | Times Cited: 8

Characterizing glucokinase variant mechanisms using a multiplexed abundance assay
Sarah Gersing, Thea K. Schulze, Matteo Cagiada, et al.
Genome biology (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 8

Site saturation mutagenesis of 500 human protein domains reveals the contribution of protein destabilization to genetic disease
Antoni Beltran, Xuege Jiang, Yue Shen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 8

Identifying protein conformational states in the Protein Data Bank: Toward unlocking the potential of integrative dynamics studies
Joseph I. J. Ellaway, Stephen Anyango, Sreenath Nair, et al.
Structural Dynamics (2024) Vol. 11, Iss. 3
Open Access | Times Cited: 8

Functionally Important Residues from Graph Analysis of Coevolved Dynamic couplings
Min Xu, Sarath Chandra Dantu, James A. Garnett, et al.
eLife (2025) Vol. 14
Open Access | Times Cited: 1

Prospective Evaluation of Structure-Based Simulations Reveal Their Ability to Predict the Impact of Kinase Mutations on Inhibitor Binding
Sukrit Singh, Vytautas Gapsys, Matteo Aldeghi, et al.
The Journal of Physical Chemistry B (2025)
Open Access | Times Cited: 1

Computational approaches for predicting variant impact: An overview from resources, principles to applications
Ye Liu, William S.B. Yeung, Philip C.N. Chiu, et al.
Frontiers in Genetics (2022) Vol. 13
Open Access | Times Cited: 31

Lynch syndrome, molecular mechanisms and variant classification
Amanda B. Abildgaard, Sofie V. Nielsen, Inge Bernstein, et al.
British Journal of Cancer (2022) Vol. 128, Iss. 5, pp. 726-734
Open Access | Times Cited: 28

Learning protein fitness landscapes with deep mutational scanning data from multiple sources
Lin Chen, Zehong Zhang, Zhenghao Li, et al.
Cell Systems (2023) Vol. 14, Iss. 8, pp. 706-721.e5
Open Access | Times Cited: 20

Interpreting the molecular mechanisms of disease variants in human transmembrane proteins
Johanna K. S. Tiemann, Henrike Zschach, Kresten Lindorff‐Larsen, et al.
Biophysical Journal (2023) Vol. 122, Iss. 11, pp. 2176-2191
Open Access | Times Cited: 17

Correspondence between functional scores from deep mutational scans and predicted effects on protein stability
Lukas Gerasimavicius, Benjamin Livesey, Joseph A. Marsh
Protein Science (2023) Vol. 32, Iss. 7
Open Access | Times Cited: 16

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