OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Advancing the field of computational drug design using multicanonical molecular dynamics-based dynamic docking
Gert‐Jan Bekker, Narutoshi Kamiya
Biophysical Reviews (2022) Vol. 14, Iss. 6, pp. 1349-1358
Closed Access | Times Cited: 14
Gert‐Jan Bekker, Narutoshi Kamiya
Biophysical Reviews (2022) Vol. 14, Iss. 6, pp. 1349-1358
Closed Access | Times Cited: 14
Showing 14 citing articles:
Protein Data Bank Japan: Computational resources for analysis of protein structures
Gert‐Jan Bekker, Chioko Nagao, Matsuyuki Shirota, et al.
Journal of Molecular Biology (2025), pp. 169013-169013
Open Access | Times Cited: 1
Gert‐Jan Bekker, Chioko Nagao, Matsuyuki Shirota, et al.
Journal of Molecular Biology (2025), pp. 169013-169013
Open Access | Times Cited: 1
Protein Data Bank Japan: Improved tools for sequence‐oriented analysis of protein structures
Gert‐Jan Bekker, Chioko Nagao, Matsuyuki Shirota, et al.
Protein Science (2025) Vol. 34, Iss. 3
Open Access
Gert‐Jan Bekker, Chioko Nagao, Matsuyuki Shirota, et al.
Protein Science (2025) Vol. 34, Iss. 3
Open Access
Binding Mechanism of Riboswitch to Natural Ligand Elucidated by McMD-Based Dynamic Docking Simulations
Gert‐Jan Bekker, Yoshifumi Fukunishi, Junichi Higo, et al.
ACS Omega (2024)
Open Access | Times Cited: 2
Gert‐Jan Bekker, Yoshifumi Fukunishi, Junichi Higo, et al.
ACS Omega (2024)
Open Access | Times Cited: 2
Benchmarking different docking protocols for predicting the binding poses of ligands complexed with cyclooxygenase enzymes and screening chemical libraries
Sara Shamsian, Babak Sokouti, Siavoush Dastmalchi
Bioimpacts (2023) Vol. 14, pp. 29955-29955
Open Access | Times Cited: 7
Sara Shamsian, Babak Sokouti, Siavoush Dastmalchi
Bioimpacts (2023) Vol. 14, pp. 29955-29955
Open Access | Times Cited: 7
Mutual induced-fit mechanism drives binding between intrinsically disordered Bim and cryptic binding site of Bcl-xL
Gert‐Jan Bekker, Mitsugu Araki, Kanji Oshima, et al.
Communications Biology (2023) Vol. 6, Iss. 1
Open Access | Times Cited: 6
Gert‐Jan Bekker, Mitsugu Araki, Kanji Oshima, et al.
Communications Biology (2023) Vol. 6, Iss. 1
Open Access | Times Cited: 6
PaStEL: Generator of Pathways with Structural Change on Pseudo Free-Energy Landscape from CryoEM Images
Atsushi Tokuhisa, Kimihiro Yamazaki, Yuichiro Wada, et al.
(2024)
Open Access | Times Cited: 1
Atsushi Tokuhisa, Kimihiro Yamazaki, Yuichiro Wada, et al.
(2024)
Open Access | Times Cited: 1
Protein structure and dynamics in the era of integrative structural biology
Rita Grandori
Frontiers in Biophysics (2023) Vol. 1
Open Access | Times Cited: 4
Rita Grandori
Frontiers in Biophysics (2023) Vol. 1
Open Access | Times Cited: 4
Elucidation of binding mechanism, affinity, and complex structure between mWT1 tumor‐associated antigen peptide and HLA‐A *24:02
Gert‐Jan Bekker, Nobutaka Numoto, Maki Kawasaki, et al.
Protein Science (2023) Vol. 32, Iss. 10
Open Access | Times Cited: 4
Gert‐Jan Bekker, Nobutaka Numoto, Maki Kawasaki, et al.
Protein Science (2023) Vol. 32, Iss. 10
Open Access | Times Cited: 4
Enhanced Coarse-Grained Molecular Dynamics Simulation with a Smoothed Hybrid Potential Using a Neural Network Model
Ryo Kanada, Atsushi Tokuhisa, Yusuke Nagasaka, et al.
Journal of Chemical Theory and Computation (2023) Vol. 20, Iss. 1, pp. 7-17
Closed Access | Times Cited: 4
Ryo Kanada, Atsushi Tokuhisa, Yusuke Nagasaka, et al.
Journal of Chemical Theory and Computation (2023) Vol. 20, Iss. 1, pp. 7-17
Closed Access | Times Cited: 4
Computational biophysics and structural biology of proteins—a Special Issue in honor of Prof. Haruki Nakamura’s 70th birthday
Damien Hall, Gautam Basu, Nobutoshi Ito
Biophysical Reviews (2022) Vol. 14, Iss. 6, pp. 1211-1222
Open Access | Times Cited: 4
Damien Hall, Gautam Basu, Nobutoshi Ito
Biophysical Reviews (2022) Vol. 14, Iss. 6, pp. 1211-1222
Open Access | Times Cited: 4
Binding Mechanism between Platelet Glycoprotein and Cyclic Peptide Elucidated by McMD-Based Dynamic Docking
Gert‐Jan Bekker, Kanji Oshima, Mitsugu Araki, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 10, pp. 4158-4167
Closed Access
Gert‐Jan Bekker, Kanji Oshima, Mitsugu Araki, et al.
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 10, pp. 4158-4167
Closed Access
Familial Episodic Pain Syndrome: A Japanese Family Harboring the Novel Variant c.2431C>T (p.Leu811Phe) in SCN11A
Chioko Nagao, Hiroko Okuda, Gert‐Jan Bekker, et al.
Biochemical Genetics (2024)
Closed Access
Chioko Nagao, Hiroko Okuda, Gert‐Jan Bekker, et al.
Biochemical Genetics (2024)
Closed Access
Structural dynamics of the Ca2+-regulated cutinase towards structure-based improvement of PET degradation activity
Nobutaka Numoto, F. Kondo, Gert‐Jan Bekker, et al.
International Journal of Biological Macromolecules (2024), pp. 136597-136597
Closed Access
Nobutaka Numoto, F. Kondo, Gert‐Jan Bekker, et al.
International Journal of Biological Macromolecules (2024), pp. 136597-136597
Closed Access
Structural analysis of human G‐protein‐coupled receptor 17 ligand binding sites
Konda Mani Saravanan, Thiyagarajan Ramesh, Olli Yli‐Harja, et al.
Journal of Cellular Biochemistry (2023) Vol. 124, Iss. 4, pp. 533-544
Closed Access
Konda Mani Saravanan, Thiyagarajan Ramesh, Olli Yli‐Harja, et al.
Journal of Cellular Biochemistry (2023) Vol. 124, Iss. 4, pp. 533-544
Closed Access
