OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Metadynamics to Enhance Sampling in Biomolecular Simulations
Jim Pfaendtner
Methods in molecular biology (2019), pp. 179-200
Closed Access | Times Cited: 14
Jim Pfaendtner
Methods in molecular biology (2019), pp. 179-200
Closed Access | Times Cited: 14
Showing 14 citing articles:
Enhanced Sampling Methods for Molecular Dynamics Simulations [Article v1.0]
Jérôme Hénin, Tony Lelièvre, Michael R. Shirts, et al.
Living Journal of Computational Molecular Science (2022) Vol. 4, Iss. 1
Open Access | Times Cited: 47
Jérôme Hénin, Tony Lelièvre, Michael R. Shirts, et al.
Living Journal of Computational Molecular Science (2022) Vol. 4, Iss. 1
Open Access | Times Cited: 47
Atomistic simulations of the Escherichia coli ribosome provide selection criteria for translationally active substrates
Zoe L. Watson, Isaac J. Knudson, Fred R. Ward, et al.
Nature Chemistry (2023) Vol. 15, Iss. 7, pp. 913-921
Open Access | Times Cited: 23
Zoe L. Watson, Isaac J. Knudson, Fred R. Ward, et al.
Nature Chemistry (2023) Vol. 15, Iss. 7, pp. 913-921
Open Access | Times Cited: 23
Advanced computational approaches to understand protein aggregation
Deepshikha Ghosh, Anushka Biswas, Mithun Radhakrishna
Biophysics Reviews (2024) Vol. 5, Iss. 2
Closed Access | Times Cited: 4
Deepshikha Ghosh, Anushka Biswas, Mithun Radhakrishna
Biophysics Reviews (2024) Vol. 5, Iss. 2
Closed Access | Times Cited: 4
Molecular Modelling in Bioactive Peptide Discovery and Characterisation
Clement Agoni, Raúl Fernández-Díaz, Patrick Brendan Timmons, et al.
Biomolecules (2025) Vol. 15, Iss. 4, pp. 524-524
Open Access
Clement Agoni, Raúl Fernández-Díaz, Patrick Brendan Timmons, et al.
Biomolecules (2025) Vol. 15, Iss. 4, pp. 524-524
Open Access
Synergistic Approach of Ultrafast Spectroscopy and Molecular Simulations in the Characterization of Intramolecular Charge Transfer in Push-Pull Molecules
Barbara Patrizi, Concetta Cozza, Adriana Pietropaolo, et al.
Molecules (2020) Vol. 25, Iss. 2, pp. 430-430
Open Access | Times Cited: 30
Barbara Patrizi, Concetta Cozza, Adriana Pietropaolo, et al.
Molecules (2020) Vol. 25, Iss. 2, pp. 430-430
Open Access | Times Cited: 30
Enhanced Sampling Approach to the Induced-Fit Docking Problem in Protein–Ligand Binding: The Case of Mono-ADP-Ribosylation Hydrolase Inhibitors
Qianqian Zhao, Riccardo Capelli, Paolo Carloni, et al.
Journal of Chemical Theory and Computation (2021) Vol. 17, Iss. 12, pp. 7899-7911
Open Access | Times Cited: 20
Qianqian Zhao, Riccardo Capelli, Paolo Carloni, et al.
Journal of Chemical Theory and Computation (2021) Vol. 17, Iss. 12, pp. 7899-7911
Open Access | Times Cited: 20
: A Toolkit for Autonomous, User-Guided Construction of Machine-Learned Potential Energy Surfaces
Kai Töpfer, Luis Itza Vazquez-Salazar, Markus Meuwly
Computer Physics Communications (2024), pp. 109446-109446
Open Access | Times Cited: 2
Kai Töpfer, Luis Itza Vazquez-Salazar, Markus Meuwly
Computer Physics Communications (2024), pp. 109446-109446
Open Access | Times Cited: 2
Template Entrance Channel as Possible Allosteric Inhibition and Resistance Site for Quinolines Tricyclic Derivatives in RNA Dependent RNA Polymerase of Bovine Viral Diarrhea Virus
Mitul Srivastava, Lovika Mittal, Debapriyo Sarmadhikari, et al.
Pharmaceuticals (2023) Vol. 16, Iss. 3, pp. 376-376
Open Access | Times Cited: 4
Mitul Srivastava, Lovika Mittal, Debapriyo Sarmadhikari, et al.
Pharmaceuticals (2023) Vol. 16, Iss. 3, pp. 376-376
Open Access | Times Cited: 4
Deciphering Photoreceptors Through Atomistic Modeling from Light Absorption to Conformational Response
Giacomo Salvadori, Patrizia Mazzeo, Davide Accomasso, et al.
Journal of Molecular Biology (2023) Vol. 436, Iss. 5, pp. 168358-168358
Open Access | Times Cited: 3
Giacomo Salvadori, Patrizia Mazzeo, Davide Accomasso, et al.
Journal of Molecular Biology (2023) Vol. 436, Iss. 5, pp. 168358-168358
Open Access | Times Cited: 3
Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substrates
Zoe L. Watson, Isaac J. Knudson, Fred R. Ward, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 4
Zoe L. Watson, Isaac J. Knudson, Fred R. Ward, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 4
An Enhanced Sampling Approach to the Induced Fit Docking Problem in Protein-Ligand Binding: the case of mono-ADP-ribosylation hydrolases inhibitors
Qianqian Zhao, Riccardo Capelli, Paolo Carloni, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 1
Qianqian Zhao, Riccardo Capelli, Paolo Carloni, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 1
Identification of inhibitors against SARS-CoV-2 variants of concern using virtual screening and metadynamics-based enhanced sampling
Nabanita Mandal, Soumya Lipsa Rath
Chemical Physics (2023) Vol. 573, pp. 111995-111995
Open Access
Nabanita Mandal, Soumya Lipsa Rath
Chemical Physics (2023) Vol. 573, pp. 111995-111995
Open Access
Applications of molecular dynamics simulation in biomolecular folding and recognition
Justin Tze Yang Ng
(2020)
Open Access
Justin Tze Yang Ng
(2020)
Open Access
Shape factors in the binding of soft fluorescent nanoshuttles with target receptors
Concetta Cozza, Françisco M. Raymo, Adriana Pietropaolo
Molecular Systems Design & Engineering (2021) Vol. 6, Iss. 4, pp. 281-285
Closed Access
Concetta Cozza, Françisco M. Raymo, Adriana Pietropaolo
Molecular Systems Design & Engineering (2021) Vol. 6, Iss. 4, pp. 281-285
Closed Access
