
OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
TheAutoDock suite at 30
David S. Goodsell, Michel F. Sanner, Arthur J. Olson, et al.
Protein Science (2020) Vol. 30, Iss. 1, pp. 31-43
Open Access | Times Cited: 146
David S. Goodsell, Michel F. Sanner, Arthur J. Olson, et al.
Protein Science (2020) Vol. 30, Iss. 1, pp. 31-43
Open Access | Times Cited: 146
Showing 1-25 of 146 citing articles:
AlphaFold 2: Why It Works and Its Implications for Understanding the Relationships of Protein Sequence, Structure, and Function
Jeffrey Skolnick, Mu Gao, Hongyi Zhou, et al.
Journal of Chemical Information and Modeling (2021) Vol. 61, Iss. 10, pp. 4827-4831
Open Access | Times Cited: 176
Jeffrey Skolnick, Mu Gao, Hongyi Zhou, et al.
Journal of Chemical Information and Modeling (2021) Vol. 61, Iss. 10, pp. 4827-4831
Open Access | Times Cited: 176
Application of molecular dynamics simulation in biomedicine
Xiaodong Wu, Li‐Yan Xu, En‐Min Li, et al.
Chemical Biology & Drug Design (2022) Vol. 99, Iss. 5, pp. 789-800
Closed Access | Times Cited: 74
Xiaodong Wu, Li‐Yan Xu, En‐Min Li, et al.
Chemical Biology & Drug Design (2022) Vol. 99, Iss. 5, pp. 789-800
Closed Access | Times Cited: 74
AlphaFold2 protein structure prediction: Implications for drug discovery
Neera Borkakoti, Janet M. Thornton
Current Opinion in Structural Biology (2023) Vol. 78, pp. 102526-102526
Open Access | Times Cited: 56
Neera Borkakoti, Janet M. Thornton
Current Opinion in Structural Biology (2023) Vol. 78, pp. 102526-102526
Open Access | Times Cited: 56
Molecular docking and molecular dynamics simulation
Sakshi Singh, Qanita Bani Baker, Dev Bukhsh Singh
Elsevier eBooks (2021), pp. 291-304
Closed Access | Times Cited: 69
Sakshi Singh, Qanita Bani Baker, Dev Bukhsh Singh
Elsevier eBooks (2021), pp. 291-304
Closed Access | Times Cited: 69
The electrostatic potential of the Omicron variant spike is higher than in Delta and Delta‐plus variants: A hint to higher transmissibility?
Stefano Pascarella, Massimo Ciccozzi, Martina Bianchi, et al.
Journal of Medical Virology (2021) Vol. 94, Iss. 4, pp. 1277-1280
Open Access | Times Cited: 68
Stefano Pascarella, Massimo Ciccozzi, Martina Bianchi, et al.
Journal of Medical Virology (2021) Vol. 94, Iss. 4, pp. 1277-1280
Open Access | Times Cited: 68
Accelerating AutoDock Vina with GPUs
Shidi Tang, Ruiqi Chen, Mengru Lin, et al.
Molecules (2022) Vol. 27, Iss. 9, pp. 3041-3041
Open Access | Times Cited: 65
Shidi Tang, Ruiqi Chen, Mengru Lin, et al.
Molecules (2022) Vol. 27, Iss. 9, pp. 3041-3041
Open Access | Times Cited: 65
Schiff bases from chlorine substituted anilines and salicylaldehyde: Synthesis, characterization, fluorescence, thermal features, biological studies and electronic structure investigations
K.J. Rajimon, N. Elangovan, Ali A. Khairbek, et al.
Journal of Molecular Liquids (2022) Vol. 370, pp. 121055-121055
Closed Access | Times Cited: 61
K.J. Rajimon, N. Elangovan, Ali A. Khairbek, et al.
Journal of Molecular Liquids (2022) Vol. 370, pp. 121055-121055
Closed Access | Times Cited: 61
An in-depth study of the synthesis, electronic framework, and pharmacological profiling of 1-(anthracen-9-yl)-N-(4-nitrophenyl) methanimine: In vitro and in silico investigations on molecular docking, dynamics simulation, BSA/DNA binding and toxicity studies
K.J. Rajimon, N. Sreelakshmi, Deepthi S. Rajendran Nair, et al.
Chemical Physics Impact (2024) Vol. 8, pp. 100462-100462
Open Access | Times Cited: 11
K.J. Rajimon, N. Sreelakshmi, Deepthi S. Rajendran Nair, et al.
Chemical Physics Impact (2024) Vol. 8, pp. 100462-100462
Open Access | Times Cited: 11
Exploring the structure and dynamics of a fluorescent schiff base (1E,1′E)-1,1′-(1,4-phenylene) bis(N-(4-chlorophenyl) methamine: Synthesis, spectroscopic analysis, thermal, electronic and crystallographic study with biological applications
K.J. Rajimon, Abdullah Yahya Abdullah Alzahrani, Deepthi S. Rajendran Nair, et al.
Journal of Molecular Structure (2024) Vol. 1312, pp. 138546-138546
Closed Access | Times Cited: 10
K.J. Rajimon, Abdullah Yahya Abdullah Alzahrani, Deepthi S. Rajendran Nair, et al.
Journal of Molecular Structure (2024) Vol. 1312, pp. 138546-138546
Closed Access | Times Cited: 10
Synthesis, vibrational analysis, absorption and emission spectral studies, topology and molecular docking studies on sulfadiazine derivative
N. Elangovan, S. Sowrirajan, Natarajan Arumugam, et al.
ChemistrySelect (2024) Vol. 9, Iss. 10
Closed Access | Times Cited: 9
N. Elangovan, S. Sowrirajan, Natarajan Arumugam, et al.
ChemistrySelect (2024) Vol. 9, Iss. 10
Closed Access | Times Cited: 9
The role of weak interactions in evaluation of inhibitory potential of Indinavir as an HIV protease inhibitor and its comparison with innovative drug candidates
Mehdi Yoosefian, Hanieh Sabaghian
Computers in Biology and Medicine (2025) Vol. 187, pp. 109675-109675
Closed Access
Mehdi Yoosefian, Hanieh Sabaghian
Computers in Biology and Medicine (2025) Vol. 187, pp. 109675-109675
Closed Access
Synthesis, solvent role (water and DMSO), antimicrobial activity, reactivity analysis, inter and intramolecular charge transfer, topology, and molecular docking studies on adenine derivative
N. Elangovan, S. Sowrirajan, Natarajan Arumugam, et al.
Journal of Molecular Liquids (2023) Vol. 391, pp. 123250-123250
Closed Access | Times Cited: 18
N. Elangovan, S. Sowrirajan, Natarajan Arumugam, et al.
Journal of Molecular Liquids (2023) Vol. 391, pp. 123250-123250
Closed Access | Times Cited: 18
Contrastive pre-training and 3D convolution neural network for RNA and small molecule binding affinity prediction
Saisai Sun, Lin Gao
Bioinformatics (2024) Vol. 40, Iss. 4
Open Access | Times Cited: 6
Saisai Sun, Lin Gao
Bioinformatics (2024) Vol. 40, Iss. 4
Open Access | Times Cited: 6
Exploration of newly synthesized azo-thiohydantoins as the potential alkaline phosphatase inhibitors via advanced biochemical characterization and molecular modeling approaches
Hafiz Muhammad Attaullah, Syeda Abida Ejaz, Pervaiz Ali Channar, et al.
BMC Chemistry (2024) Vol. 18, Iss. 1
Open Access | Times Cited: 5
Hafiz Muhammad Attaullah, Syeda Abida Ejaz, Pervaiz Ali Channar, et al.
BMC Chemistry (2024) Vol. 18, Iss. 1
Open Access | Times Cited: 5
Spectroscopic characterization, DFT, antimicrobial activity and molecular docking studies on 4,5-bis[(E)-2-phenylethenyl]-1H,1′H-2,2′-biimidazole
Mathiyalagan Kiruthika, R Raveena, R Yogeswaran, et al.
Heliyon (2024) Vol. 10, Iss. 9, pp. e29566-e29566
Open Access | Times Cited: 5
Mathiyalagan Kiruthika, R Raveena, R Yogeswaran, et al.
Heliyon (2024) Vol. 10, Iss. 9, pp. e29566-e29566
Open Access | Times Cited: 5
A claudin5-binding peptide enhances the permeability of the blood-brain barrier in vitro
Martina Trevisani, Alessandro Berselli, Giulio Alberini, et al.
Science Advances (2025) Vol. 11, Iss. 2
Open Access
Martina Trevisani, Alessandro Berselli, Giulio Alberini, et al.
Science Advances (2025) Vol. 11, Iss. 2
Open Access
Virtual screening: hope, hype, and the fine line in between
Hossam Nada, Nicholas A. Meanwell, Moustafa T. Gabr
Expert Opinion on Drug Discovery (2025)
Closed Access
Hossam Nada, Nicholas A. Meanwell, Moustafa T. Gabr
Expert Opinion on Drug Discovery (2025)
Closed Access
In silico Analysis of Natural Iridoids as Primary Amoebic Meningoencephalitis Inhibitors: Molecular Docking, MD Simulation, MMPBSA, and DFT Analyses
Prinsa Prinsa, Supriyo Saha
Journal of Experimental Biology and Agricultural Sciences (2025) Vol. 12, Iss. 6, pp. 800-828
Open Access
Prinsa Prinsa, Supriyo Saha
Journal of Experimental Biology and Agricultural Sciences (2025) Vol. 12, Iss. 6, pp. 800-828
Open Access
In-vitro antibacterial activity, Molecular docking, and MD Simulation Analysis of Phytoconstituents of Nasturtium officinale
Nitisha Negi, Sukirti Upadhyay, B. C. JOSHI, et al.
Journal of Experimental Biology and Agricultural Sciences (2025) Vol. 12, Iss. 6, pp. 838-849
Open Access
Nitisha Negi, Sukirti Upadhyay, B. C. JOSHI, et al.
Journal of Experimental Biology and Agricultural Sciences (2025) Vol. 12, Iss. 6, pp. 838-849
Open Access
Identification and Evaluation of Bioactive Compounds from Azadirachta indica as Potential Inhibitors of DENV-2 Capsid Protein: An Integrative Study Utilizing Network Pharmacology, Molecular Docking, Molecular Dynamics Simulations, and Machine Learning Techniques.
Md. Ahad Ali Khan, Md. Nazmul Hasan Zilani, Mahedi Hasan, et al.
Heliyon (2025) Vol. 11, Iss. 4, pp. e42594-e42594
Open Access
Md. Ahad Ali Khan, Md. Nazmul Hasan Zilani, Mahedi Hasan, et al.
Heliyon (2025) Vol. 11, Iss. 4, pp. e42594-e42594
Open Access
Umbelliferone attenuates calcium oxalate crystal-induced renal injury and inflammation by attenuating autophagy through the PI3K/AKT pathway
Yuexian Xu, Hu Liang, Kaiguo Xia, et al.
International Immunopharmacology (2025) Vol. 150, pp. 114250-114250
Closed Access
Yuexian Xu, Hu Liang, Kaiguo Xia, et al.
International Immunopharmacology (2025) Vol. 150, pp. 114250-114250
Closed Access
Computational Insights into the Inhibition of Cell Division in Staphylococcus aureus: Towards Novel Therapeutics
Rajendra Bhati, Alimuddin Saifi, M. S. Sangwan, et al.
Computational Biology and Chemistry (2025) Vol. 117, pp. 108391-108391
Closed Access
Rajendra Bhati, Alimuddin Saifi, M. S. Sangwan, et al.
Computational Biology and Chemistry (2025) Vol. 117, pp. 108391-108391
Closed Access
In Silico Study on the Interactions, Molecular Docking, Dynamics and Simulation of Potential Compounds from Withania somnifera (L.) Dunal Root against Cancer by Targeting KAT6A
Sanjay Deshpande, Abdullatif Bin Muhsinah, Zabin K. Bagewadi, et al.
Molecules (2023) Vol. 28, Iss. 3, pp. 1117-1117
Open Access | Times Cited: 14
Sanjay Deshpande, Abdullatif Bin Muhsinah, Zabin K. Bagewadi, et al.
Molecules (2023) Vol. 28, Iss. 3, pp. 1117-1117
Open Access | Times Cited: 14
Medicine for chronic atrophic gastritis: a systematic review, meta- and network pharmacology analysis
Jiao Weng, Xiu-fang Wu, Peng Shao, et al.
Annals of Medicine (2023) Vol. 55, Iss. 2
Open Access | Times Cited: 14
Jiao Weng, Xiu-fang Wu, Peng Shao, et al.
Annals of Medicine (2023) Vol. 55, Iss. 2
Open Access | Times Cited: 14