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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Data set and fitting dependencies when estimating protein mutant stability: Toward simple, balanced, and interpretable models
Kristoffer T. Bæk, Kasper P. Kepp
Journal of Computational Chemistry (2022) Vol. 43, Iss. 8, pp. 504-518
Open Access | Times Cited: 17

Showing 17 citing articles:

RosettaDDGPrediction for high‐throughput mutational scans: From stability to binding
Valentina Sora, Adrian Otamendi Laspiur, Kristine Degn, et al.
Protein Science (2022) Vol. 32, Iss. 1
Open Access | Times Cited: 37
PROSTATA: a framework for protein stability assessment using transformers
Dmitriy Umerenkov, Fedor Nikolaev, Tatiana Shashkova, et al.
Bioinformatics (2023) Vol. 39, Iss. 11
Open Access | Times Cited: 19
Assessing computational tools for predicting protein stability changes upon missense mutations using a new dataset
Feifan Zheng, Yang Liu, Yan Yang, et al.
Protein Science (2023) Vol. 33, Iss. 1
Closed Access | Times Cited: 10
Statistical modeling to quantify the uncertainty of FoldX-predicted protein folding and binding stability
Yesol Sapozhnikov, Jagdish Suresh Patel, F. Marty Ytreberg, et al.
BMC Bioinformatics (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 9
The role of data imbalance bias in the prediction of protein stability change upon mutation
Jianwen Fang
PLoS ONE (2023) Vol. 18, Iss. 3, pp. e0283727-e0283727
Open Access | Times Cited: 8
Stability and expression of SARS-CoV-2 spike-protein mutations
Kristoffer T. Bæk, Rukmankesh Mehra, Kasper P. Kepp
Molecular and Cellular Biochemistry (2022) Vol. 478, Iss. 6, pp. 1269-1280
Open Access | Times Cited: 12
Quantification of biases in predictions of protein–protein binding affinity changes upon mutations
Matsvei Tsishyn, Fabrizio Pucci, Marianne Rooman
Briefings in Bioinformatics (2023) Vol. 25, Iss. 1
Open Access | Times Cited: 5
Interpretable and explainable predictive machine learning models for data-driven protein engineering
David Medina-Ortiz, Ashkan Khalifeh, Hoda Anvari-Kazemabad, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Modelling SARS-CoV-2 spike-protein mutation effects on ACE2 binding
Shivani Thakur, Rajaneesh Kumar Verma, Kasper P. Kepp, et al.
Journal of Molecular Graphics and Modelling (2022) Vol. 119, pp. 108379-108379
Open Access | Times Cited: 7
PROSTATA: Protein Stability Assessment using Transformers
Dmitriy Umerenkov, Tatiana Shashkova, П. В. Страшнов, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 7
Predicting virus Fitness: Towards a structure-based computational model
Shivani Thakur, Kasper P. Kepp, Rukmankesh Mehra
Journal of Structural Biology (2023) Vol. 215, Iss. 4, pp. 108042-108042
Open Access | Times Cited: 3
Stability and expression of SARS-CoV-2 spike-protein mutations
Kristoffer T. Bæk, Rukmankesh Mehra, Kasper P. Kepp
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 4
Protposer: The web server that readily proposes protein stabilizing mutations with high PPV
Helena García‐Cebollada, Alfonso López, Javier Sancho
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 2415-2433
Open Access | Times Cited: 4
Structural heterogeneity and precision of implications drawn from cryo-electron microscopy structures: SARS-CoV-2 spike-protein mutations as a test case
Rukmankesh Mehra, Kasper P. Kepp
European Biophysics Journal (2022) Vol. 51, Iss. 7-8, pp. 555-568
Open Access | Times Cited: 4
Quantification of biases in predictions of protein-protein binding affinity changes upon mutations
Matsvei Tsishyn, Fabrizio Pucci, Marianne Rooman
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access
Modelling SARS-CoV-2 spike-protein mutation effects on ACE2 binding
Shivani Thakur, Rajaneesh Kumar Verma, Kasper P. Kepp, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access
AlphaFold-based protein analysis pipeline
Octavian-Florin Maghiar
(2022) Vol. 43, pp. 338-341
Closed Access
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