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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

MOFA+: a statistical framework for comprehensive integration of multi-modal single-cell data
Ricard Argelaguet, Damien Arnol, Danila Bredikhin, et al.
Genome biology (2020) Vol. 21, Iss. 1
Open Access | Times Cited: 506

Showing 26-50 of 506 citing articles:

Identifying temporal and spatial patterns of variation from multimodal data using MEFISTO
Britta Velten, Jana M. Braunger, Ricard Argelaguet, et al.
Nature Methods (2022) Vol. 19, Iss. 2, pp. 179-186
Open Access | Times Cited: 103
SEACells infers transcriptional and epigenomic cellular states from single-cell genomics data
Sitara Persad, Zi-Ning Choo, Christine Dien, et al.
Nature Biotechnology (2023) Vol. 41, Iss. 12, pp. 1746-1757
Open Access | Times Cited: 100
MUON: multimodal omics analysis framework
Danila Bredikhin, Ilia Kats, Oliver Stegle
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 90
Single-cell biological network inference using a heterogeneous graph transformer
Anjun Ma, Xiaoying Wang, Jingxian Li, et al.
Nature Communications (2023) Vol. 14, Iss. 1
Open Access | Times Cited: 80
Integrated single-nucleus and spatial transcriptomics captures transitional states in soybean nodule maturation
Zhijian Liu, Xiangying Kong, Yanping Long, et al.
Nature Plants (2023) Vol. 9, Iss. 4, pp. 515-524
Open Access | Times Cited: 72
Single cell cancer epigenetics
Marta Casado-Peláez, Alberto Bueno-Costa, Manel Esteller
Trends in cancer (2022) Vol. 8, Iss. 10, pp. 820-838
Open Access | Times Cited: 70
Insights from multi-omics integration in complex disease primary tissues
Peter Kreitmaier, Georgia Katsoula, Eleftheria Zeggini
Trends in Genetics (2022) Vol. 39, Iss. 1, pp. 46-58
Open Access | Times Cited: 69
Into the multiverse: advances in single-cell multiomic profiling
Silvia Ogbeide, Francesca Giannese, Laura Mincarelli, et al.
Trends in Genetics (2022) Vol. 38, Iss. 8, pp. 831-843
Open Access | Times Cited: 68
Integrative spatial analysis of cell morphologies and transcriptional states with MUSE
Feng Bao, Yue Deng, Sen Wan, et al.
Nature Biotechnology (2022) Vol. 40, Iss. 8, pp. 1200-1209
Open Access | Times Cited: 67
Spatial omics technologies at multimodal and single cell/subcellular level
Jiwoon Park, Junbum Kim, Tyler Lewy, et al.
Genome biology (2022) Vol. 23, Iss. 1
Open Access | Times Cited: 67
Computational Approaches and Challenges in Spatial Transcriptomics
Shuangsang Fang, Bichao Chen, Yong Zhang, et al.
Genomics Proteomics & Bioinformatics (2022) Vol. 21, Iss. 1, pp. 24-47
Open Access | Times Cited: 63
Modeling and analyzing single-cell multimodal data with deep parametric inference
Huan Hu, Zhen Feng, Hai Lin, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 1
Closed Access | Times Cited: 49
Missing data in multi-omics integration: Recent advances through artificial intelligence
Javier E. Flores, Daniel Claborne, Zachary D. Weller, et al.
Frontiers in Artificial Intelligence (2023) Vol. 6
Open Access | Times Cited: 48
Stabilized mosaic single-cell data integration using unshared features
Shila Ghazanfar, Carolina Guibentif, John C. Marioni
Nature Biotechnology (2023) Vol. 42, Iss. 2, pp. 284-292
Open Access | Times Cited: 46
Dysbiosis of a microbiota–immune metasystem in critical illness is associated with nosocomial infections
Jared Schlechte, Amanda Z. Zucoloto, Ian-Ling Yu, et al.
Nature Medicine (2023) Vol. 29, Iss. 4, pp. 1017-1027
Open Access | Times Cited: 45
A Review of Single-Cell RNA-Seq Annotation, Integration, and Cell–Cell Communication
Changde Cheng, Wenan Chen, Hongjian Jin, et al.
Cells (2023) Vol. 12, Iss. 15, pp. 1970-1970
Open Access | Times Cited: 45
Explainable, Domain-Adaptive, and Federated Artificial Intelligence in Medicine
Ahmad Chaddad, Qizong Lu, Jiali Li, et al.
IEEE/CAA Journal of Automatica Sinica (2023) Vol. 10, Iss. 4, pp. 859-876
Open Access | Times Cited: 41
Multiomic analysis of malignant pleural mesothelioma identifies molecular axes and specialized tumor profiles driving intertumor heterogeneity
Lise Mangiante, Nicolas Alcala, Alexandra Sexton‐Oates, et al.
Nature Genetics (2023) Vol. 55, Iss. 4, pp. 607-618
Open Access | Times Cited: 39
Multiomic spatial landscape of innate immune cells at human central nervous system borders
Roman Sankowski, Patrick Süß, Alexander Benkendorff, et al.
Nature Medicine (2023) Vol. 30, Iss. 1, pp. 186-198
Open Access | Times Cited: 37
A fast, scalable and versatile tool for analysis of single-cell omics data
Kai Zhang, Nathan R. Zemke, Ethan J. Armand, et al.
Nature Methods (2024) Vol. 21, Iss. 2, pp. 217-227
Open Access | Times Cited: 35
Mosaic integration and knowledge transfer of single-cell multimodal data with MIDAS
眞智子 平賀, Shuofeng Hu, Yaowen Chen, et al.
Nature Biotechnology (2024) Vol. 42, Iss. 10, pp. 1594-1605
Open Access | Times Cited: 20
Deciphering spatial domains from spatial multi-omics with SpatialGlue
Yahui Long, Kok Siong Ang, Raman Sethi, et al.
Nature Methods (2024) Vol. 21, Iss. 9, pp. 1658-1667
Open Access | Times Cited: 15
High-throughput microfluidic systems accelerated by artificial intelligence for biomedical applications
Jianhua Zhou, Jianpei Dong, Hongwei Hou, et al.
Lab on a Chip (2024) Vol. 24, Iss. 5, pp. 1307-1326
Open Access | Times Cited: 13
Adipose tissue retains an epigenetic memory of obesity after weight loss
Laura C. Hinte, Daniel Castellano‐Castillo, Adhideb Ghosh, et al.
Nature (2024)
Open Access | Times Cited: 13
SLIDE: Significant Latent Factor Interaction Discovery and Exploration across biological domains
Javad Rahimikollu, Hanxi Xiao, AnnaElaine Rosengart, et al.
Nature Methods (2024) Vol. 21, Iss. 5, pp. 835-845
Closed Access | Times Cited: 12

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