OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Cell Hashing with barcoded antibodies enables multiplexing and doublet detection for single cell genomics
Marlon Stoeckius, Shiwei Zheng, Brian Houck‐Loomis, et al.
Genome biology (2018) Vol. 19, Iss. 1
Open Access | Times Cited: 861

Showing 26-50 of 861 citing articles:

Massively multiplex chemical transcriptomics at single-cell resolution
Sanjay Srivatsan, José L. McFaline‐Figueroa, Vijay Ramani, et al.
Science (2019) Vol. 367, Iss. 6473, pp. 45-51
Open Access | Times Cited: 274

Detection and removal of barcode swapping in single-cell RNA-seq data
Jonathan A. Griffiths, Arianne C. Richard, Karsten Bach, et al.
Nature Communications (2018) Vol. 9, Iss. 1
Open Access | Times Cited: 261

Self-Organizing 3D Human Trunk Neuromuscular Organoids
Jorge-Miguel Faustino Martins, Cornelius Fischer, Alessia Urzi, et al.
Cell stem cell (2020) Vol. 26, Iss. 2, pp. 172-186.e6
Open Access | Times Cited: 250

Single‐Cell Analysis Using Droplet Microfluidics
Kinga Matuła, Francesca Rivello, Wilhelm T. S. Huck
Advanced Biosystems (2019) Vol. 4, Iss. 1
Open Access | Times Cited: 233

Single-cell analysis of human non-small cell lung cancer lesions refines tumor classification and patient stratification
Andrew M. Leader, John A. Grout, Bárbara Maier, et al.
Cancer Cell (2021) Vol. 39, Iss. 12, pp. 1594-1609.e12
Open Access | Times Cited: 231

Single-cell analyses of renal cell cancers reveal insights into tumor microenvironment, cell of origin, and therapy response
Yuping Zhang, Sathiya Pandi Narayanan, Rahul Mannan, et al.
Proceedings of the National Academy of Sciences (2021) Vol. 118, Iss. 24
Open Access | Times Cited: 224

Doublet identification in single-cell sequencing data using scDblFinder
Pierre‐Luc Germain, Aaron T. L. Lun, Carlos Garcia Meixide, et al.
F1000Research (2022) Vol. 10, pp. 979-979
Open Access | Times Cited: 218

Vireo: Bayesian demultiplexing of pooled single-cell RNA-seq data without genotype reference
Yuanhua Huang, Davis J. McCarthy, Oliver Stegle
Genome biology (2019) Vol. 20, Iss. 1
Open Access | Times Cited: 216

Second-Strand Synthesis-Based Massively Parallel scRNA-Seq Reveals Cellular States and Molecular Features of Human Inflammatory Skin Pathologies
Travis Hughes, Marc H. Wadsworth, Todd M. Gierahn, et al.
Immunity (2020) Vol. 53, Iss. 4, pp. 878-894.e7
Open Access | Times Cited: 216

Challenges in measuring and understanding biological noise
Nils Eling, Michael D. Morgan, John C. Marioni
Nature Reviews Genetics (2019) Vol. 20, Iss. 9, pp. 536-548
Open Access | Times Cited: 206

scds: computational annotation of doublets in single-cell RNA sequencing data
Abha Bais, Dennis Kostka
Bioinformatics (2019) Vol. 36, Iss. 4, pp. 1150-1158
Open Access | Times Cited: 206

Time-resolved systems immunology reveals a late juncture linked to fatal COVID-19
Can Liu, Andrew J. Martins, William Lau, et al.
Cell (2021) Vol. 184, Iss. 7, pp. 1836-1857.e22
Open Access | Times Cited: 206

Anti-GD2 CAR-NKT cells in patients with relapsed or refractory neuroblastoma: an interim analysis
Andras Heczey, Amy N. Courtney, Antonino Montalbano, et al.
Nature Medicine (2020) Vol. 26, Iss. 11, pp. 1686-1690
Open Access | Times Cited: 202

Neuronal diversity and convergence in a visual system developmental atlas
Mehmet Neset Özel, Félix Simon, Shadi Jafari, et al.
Nature (2020) Vol. 589, Iss. 7840, pp. 88-95
Open Access | Times Cited: 194

Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq
Bo Li, Joshua Gould, Yiming Yang, et al.
Nature Methods (2020) Vol. 17, Iss. 8, pp. 793-798
Open Access | Times Cited: 188

Ultra-high-throughput single-cell RNA sequencing and perturbation screening with combinatorial fluidic indexing
Paul Datlinger, André F. Rendeiro, Thorina Boenke, et al.
Nature Methods (2021) Vol. 18, Iss. 6, pp. 635-642
Open Access | Times Cited: 181

Single-cell atlas of colonic CD8+ T cells in ulcerative colitis
Daniele Corridoni, Agne Antanaviciute, Tarun Gupta, et al.
Nature Medicine (2020) Vol. 26, Iss. 9, pp. 1480-1490
Closed Access | Times Cited: 173

Broad immune activation underlies shared set point signatures for vaccine responsiveness in healthy individuals and disease activity in patients with lupus
Yuri Kotliarov, Rachel Sparks, Andrew J. Martins, et al.
Nature Medicine (2020) Vol. 26, Iss. 4, pp. 618-629
Open Access | Times Cited: 170

Single-cell multimodal glioma analyses identify epigenetic regulators of cellular plasticity and environmental stress response
Kevin C. Johnson, Kevin Anderson, Elise T. Courtois, et al.
Nature Genetics (2021) Vol. 53, Iss. 10, pp. 1456-1468
Open Access | Times Cited: 167

Modeling neural tube development by differentiation of human embryonic stem cells in a microfluidic WNT gradient
Pedro Rifes, Marc Isaksson, Gaurav Rathore, et al.
Nature Biotechnology (2020) Vol. 38, Iss. 11, pp. 1265-1273
Closed Access | Times Cited: 166

DoubletDecon: Deconvoluting Doublets from Single-Cell RNA-Sequencing Data
Erica A. K. DePasquale, Daniel Schnell, Pieter-Jan Van Camp, et al.
Cell Reports (2019) Vol. 29, Iss. 6, pp. 1718-1727.e8
Open Access | Times Cited: 164

Dynamics of Cardiac Neutrophil Diversity in Murine Myocardial Infarction
Ehsan Vafadarnejad, Giuseppe Rizzo, Laura Krampert, et al.
Circulation Research (2020) Vol. 127, Iss. 9
Open Access | Times Cited: 163

Intratumoral dendritic cell–CD4+ T helper cell niches enable CD8+ T cell differentiation following PD-1 blockade in hepatocellular carcinoma
Assaf Magen, Pauline Hamon, Nathalie Fiaschi, et al.
Nature Medicine (2023) Vol. 29, Iss. 6, pp. 1389-1399
Closed Access | Times Cited: 161

Solo: Doublet Identification in Single-Cell RNA-Seq via Semi-Supervised Deep Learning
Nicholas Bernstein, Nicole L. Fong, Irene Lam, et al.
Cell Systems (2020) Vol. 11, Iss. 1, pp. 95-101.e5
Open Access | Times Cited: 159

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