Open Access Helper

OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Sequence modeling and design from molecular to genome scale with Evo
Éric Nguyen, Michael Poli, Matthew G. Durrant, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 50

Showing 26-50 of 50 citing articles:

FAST-STEM: A human pluripotent stem cell engineering toolkit for rapid design-build-test-learn development of human cell-based therapeutic devices
Aaron H. Rosenstein, Rangarajan Sambathkumar, Brandon Murareanu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Programmable biology through artificial intelligence: from nucleic acids to proteins to cells
Omar O. Abudayyeh, Jonathan S. Gootenberg
Nature Methods (2024) Vol. 21, Iss. 8, pp. 1384-1386
Closed Access | Times Cited: 1
Advancing CRISPR base editing technology through innovative strategies and ideas
Xiongwei Fan, Lei Yang, Liren Wang, et al.
Science China Life Sciences (2024)
Closed Access | Times Cited: 1
Long-context Protein Language Model
Yingheng Wang, Zichen Wang, Gil Sadeh, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Unlocking data in Klebsiella lysogens to predict capsular type-specificity of phage depolymerases
Robby Concha-Eloko, Rafael Sanjuán, Beatriz Beamud, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Protein Set Transformer: A protein-based genome language model to power high diversity viromics
Cody Martin, Anthony Gitter, Karthik Anantharaman
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Annotation Vocabulary (Might Be) All You Need
Logan Hallee, Niko Rafailidis, Colin Horger, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
An outlook on structural biology after AlphaFold: tools, limits and perspectives
Serena Rosignoli, M Pacelli, Francesca Manganiello, et al.
FEBS Open Bio (2024) Vol. 15, Iss. 2, pp. 202-222
Open Access
Deciphering RNA regulation with a foundation language model
Hanwen Zhou, Yue Hu, Yulong Zheng, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Bridging biomolecular modalities for knowledge transfer in bio-language models
Mangal Prakash, Artem Moskalev, Peter A. DiMaggio, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
The design and engineering of synthetic genomes
Joshua S. James, Junbiao Dai, Wei Leong Chew, et al.
Nature Reviews Genetics (2024)
Closed Access
Genomic resources, opportunities, and prospects for accelerated improvement of millets
F. K. Kasule, Oumar Diack, Modou Mamoune Mbaye, et al.
Theoretical and Applied Genetics (2024) Vol. 137, Iss. 12
Open Access
Accurate and General DNA Representations Emerge from Genome Foundation Models at Scale
Caleb N. Ellington, Nian X. Sun, Nicholas Ho, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Hyena architecture enables fast and efficient protein language modeling
Y. T. Zhang, Bian Bian, Manabu Okumura
iMetaOmics. (2024)
Closed Access
Identification, characterization, and design of plant genome sequences using deep learning
Zhenye Wang, Hao Yuan, Jianbing Yan, et al.
The Plant Journal (2024)
Open Access
Transformer Model Generated Bacteriophage Genomes are Compositionally Distinct from Natural Sequences
Jeremy Ratcliff
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Enhancing biodiversity monitoring efficiency through CRISPR-driven depletion and enrichment of aquatic environmental DNA
Anya Kardailsky, Benjamín Durán‐Vinet, Georgia Nester, et al.
(2024)
Open Access
Are Genomic Language Models All You Need? Exploring Genomic Language Models on Protein Downstream Tasks
Sam Boshar, Evan Trop, Bernardo P. de Almeida, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
ema-tool: a Python Library for the Comparative Analysis of Embeddings from Biomedical Foundation Models
Pia Francesca Rissom, Paulo Yanez Sarmiento, Jordan Safer, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Closed Access
The Natural Future for AI in Biotech: The Next Generation of Machine Learning Demands Partnership with Biodiversity
Oliver Vince, Glen Gowers, Siân McGibbon
GEN Biotechnology (2024) Vol. 3, Iss. 4, pp. 220-227
Closed Access
A long context RNA foundation model for predicting transcriptome architecture
Alihossein Saberi, Man Hung Choi, Simai Wang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
AI-generated small binder improves prime editing
Ju-Chan Park, Heesoo Uhm, Yong Woo Kim, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Ai-Generated Small Binder Improves Prime Editing
Ju-Chan Park, Heesoo Uhm, Yong Woo Kim, et al.
(2024)
Closed Access
De novo Design of Supramolecular Nucleic Acid Systems Using Foundation Models
Effirul Ikhwan Ramlan, Mohd Firdaus‐Raih
Elsevier eBooks (2024)
Closed Access
MethylQUEEN: A Methylation Encoded DNA Foundation Model
Mingyang Li, Ruichu Gu, Shiyu Fan, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
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