Open Access Helper

OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Universal Cell Embeddings: A Foundation Model for Cell Biology
Yanay Rosen, Yusuf Roohani, Ayush Agrawal, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 39

Showing 26-50 of 39 citing articles:

Integrating single-cell RNA-seq datasets with substantial batch effects
Karin Hrovatin, Amir Ali Moinfar, Luke Zappia, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
AI Health Agents: Pathway2vec, ReflectE, Category Theory, and Longevity
Melanie Swan, Takashi Kido, Eric Roland, et al.
Proceedings of the AAAI Symposium Series (2024) Vol. 3, Iss. 1, pp. 426-433
Open Access
James German and the Quest to Understand Human RECQ Helicase Deficiencies
Raymond J. Monnat
Cells (2024) Vol. 13, Iss. 13, pp. 1077-1077
Open Access
Physical modeling of embryonic transcriptomes identifies collective modes of gene expression
Dominic J. Skinner, Patrick Lemaire, Madhav Mani
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Scupa: Single-cell unified polarization assessment of immune cells using the single-cell foundation model
Wendao Liu, Zhongming Zhao
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
A primer on single‐cell RNA‐seq analysis using dendritic cells as a case study
Giulia Protti, Roberto Spreafico
FEBS Letters (2024)
Closed Access
scEMB: Learning context representation of genes based on large-scale single-cell transcriptomics
Kang‐Lin Hsieh, Chu Yan, Xiaoyang Li, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
scGenePT: Is language all you need for modeling single-cell perturbations?
Ana-Maria Istrate, Donghui Li, Theofanis Karaletsos
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
CancerFoundation: A single-cell RNA sequencing foundation model to decipher drug resistance in cancer
Allison Theus, Florian Barkmann, David Wissel, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
The cellular dogma
Stephen R. Quake
Cell (2024) Vol. 187, Iss. 23, pp. 6421-6423
Closed Access
BioLLM: A Standardized Framework for Integrating and Benchmarking Single-Cell Foundation Models
Ping Qiu, Qian Qian Chen, Hua Qin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Scaling Dense Representations for Single Cell with Transcriptome-Scale Context
Nicholas Ho, Caleb N. Ellington, Jing Hou, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Addressing Wide-Data Studies of Gene Expression Microarrays with the Relevance Feature and Vector Machine
Albert Belenguer-Llorens, Carlos Sevilla salcedo, Emilio Parrado Hernández, et al.
(2024)
Closed Access
scMusketeers: Addressing imbalanced cell type annotation and batch effect reduction with a modular autoencoder
Antoine Collin, Shawn Pelletier, Morgane Fierville, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
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