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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

Dictionary learning for integrative, multimodal, and scalable single-cell analysis
Yuhan Hao, Tim Stuart, Madeline H. Kowalski, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 110

Showing 26-50 of 110 citing articles:

IGFBP6 regulates extracellular vesicles formation via cholesterol abundance in MDA-MB-231 cells
M. Yu. Shkurnikov, Darya Averinskaya, Elena Stekolshchikova, et al.
Biochimie (2024)
Closed Access | Times Cited: 4
Multimodal weakly supervised learning to identify disease-specific changes in single-cell atlases
Anastasia Litinetskaya, Maiia Shulman, Soroor Hediyeh-zadeh, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 4
scMILD: Single-cell Multiple Instance Learning for Sample Classification and Associated Subpopulation Discovery
Kyeonghun Jeong, Jinwook Choi, Kwangsoo Kim
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Open Access
Lifted proximal operator machine-based deep nonlinear dictionary learning with multilayer regularization
Jie Lin, Benying Tan, Yujie Li, et al.
Neurocomputing (2025), pp. 129390-129390
Closed Access
Machine learning prediction of novel gene functions with single-cell sequencing data
Sandeep Chinnareddy, Sai Deepak Gattidi, Prakash Raj Timilsina, et al.
Elsevier eBooks (2025), pp. 349-366
Closed Access
Interneuron loss and microglia activation by transcriptome analyses in the basal ganglia of Tourette disorder
Yifan Wang, Liana Fasching, Feinan Wu, et al.
Biological Psychiatry (2025)
Closed Access
Degree-heterogeneous Latent Class Analysis for High-dimensional Discrete Data
Zhongyuan Lyu, Ling Chen, Yuqi Gu
Journal of the American Statistical Association (2025), pp. 1-25
Open Access
Revealing shared molecular drivers of brain metastases from distinct primary tumors
Carlos Alberto de Carvalho Fraga, Leandro Tiburske, Gabriel Victor Lucena Silva, et al.
Brain Research (2025), pp. 149456-149456
Closed Access
Next-generation deconvolution of the tumor microenvironment with omnideconv
Lorenzo Merotto, Alexander Dietrich, Markus List, et al.
Methods in cell biology (2025)
Closed Access
Combining single-cell ATAC and RNA sequencing for supervised cell annotation
Jaidip Gill, Abhijit Dasgupta, Brychan Manry, et al.
BMC Bioinformatics (2025) Vol. 26, Iss. 1
Open Access
Complement activation in tumor microenvironment after neoadjuvant therapy and its impact on pancreatic cancer outcomes
Xiaofei Zhang, Ruoxin Lan, Yongjun Liu, et al.
npj Precision Oncology (2025) Vol. 9, Iss. 1
Open Access
ModuCLIP: multi-scale CLIP framework for predicting foundation pit deformation in multi-modal robotic systems
Lin Wenbo, Tingting Li, Xiao Li
Frontiers in Neurorobotics (2025) Vol. 19
Open Access
A longitudinal single-cell and spatial multiomic atlas of pediatric high-grade glioma
Jonathan H. Sussman, Derek A. Oldridge, Wenbao Yu, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3
In-cell structure and snapshots ofcopiaretrotransposons in intact tissue by cryo-electron tomography
Sven Klumpe, Kirsten-André Senti, Florian Beck, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 3
Dissecting prostate Cancer: Single-Cell insight into Macrophage Diversity, molecular Prognosticators, and the role of Peptidylprolyl Isomerase F
Bo Guan, Cong Huang, Libing Meng, et al.
International Immunopharmacology (2024) Vol. 138, pp. 112599-112599
Closed Access | Times Cited: 3
Integrated Single-Cell (Phospho-)Protein and RNA Detection Uncovers Phenotypic Characteristics and Active Signal Transduction of Human Antibody-Secreting Cells
Erik van Buijtenen, Wout Janssen, Paul Vink, et al.
Molecular & Cellular Proteomics (2023) Vol. 22, Iss. 2, pp. 100492-100492
Open Access | Times Cited: 8
Image-based spatial transcriptomics identifies molecular niche dysregulation associated with distal lung remodeling in pulmonary fibrosis
Annika Vannan, Ruqian Lyu, A. Williams, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 8
RORγt+ c-Maf+ Vγ4+ γδ T cells are generated in the adult thymus but do not reach the periphery
Tao Yang, Joana Barros‐Martins, Ziqing Wang, et al.
Cell Reports (2023) Vol. 42, Iss. 10, pp. 113230-113230
Open Access | Times Cited: 7
High-Resolution Spatial Transcriptomic Atlas of Mouse Soleus Muscle: Unveiling Single Cell and Subcellular Heterogeneity in Health and Denervation
Jer-En Hsu, Lloyd Ruiz, Yongha Hwang, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
scHybridBERT: integrating gene regulation and cell graph for spatiotemporal dynamics in single-cell clustering
Wei Zhang, Wu Chenjun, Xing Feiyang, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 2
Open Access | Times Cited: 2
Ensemblex: an accuracy-weighted ensemble genetic demultiplexing framework for population-scale scRNAseq sample pooling
Michael R. Fiorini, Saeid Amiri, Allison A. Dilliott, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 2
Distinct genetic liability profiles define clinically relevant patient strata across common diseases
Lucia Trastulla, Georgii Dolgalev, Sylvain Moser, et al.
Nature Communications (2024) Vol. 15, Iss. 1
Open Access | Times Cited: 2
Compound-SNE: comparative alignment of t-SNEs for multiple single-cell omics data visualization
Colin G. Cess, Laleh Haghverdi
Bioinformatics (2024) Vol. 40, Iss. 7
Open Access | Times Cited: 2
scMultiSim: simulation of multi-modality single cell data guided by cell-cell interactions and gene regulatory networks
Hechen Li, Ziqi Zhang, Michael Squires, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 10
Seurat: Tools for Single Cell Genomics
Rahul Satija
(2017)
Closed Access | Times Cited: 17

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