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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

iFeatureOmega:an integrative platform for engineering, visualization and analysis of features from molecular sequences, structural and ligand data sets
Zhen Chen, Xuhan Liu, Pei Zhao, et al.
Nucleic Acids Research (2022) Vol. 50, Iss. W1, pp. W434-W447
Open Access | Times Cited: 57

Showing 26-50 of 57 citing articles:

Mitochondrial genome plasticity of mammalian species
Bálint Biró, Zoltán Gál, Zsófia Fekete, et al.
BMC Genomics (2024) Vol. 25, Iss. 1
Open Access | Times Cited: 2
An Ensemble Deep Learning Model for Predicting Minimum Inhibitory Concentrations of Antimicrobial Peptides Against Pathogenic Bacteria
Chia‐Ru Chung, Chung-Yu Chien, Yun Tang, et al.
iScience (2024) Vol. 27, Iss. 9, pp. 110718-110718
Open Access | Times Cited: 2
mHPpred: Accurate identification of peptide hormones using multi-view feature learning
Shaherin Basith, Vinoth Kumar Sangaraju, Balachandran Manavalan, et al.
Computers in Biology and Medicine (2024) Vol. 183, pp. 109297-109297
Closed Access | Times Cited: 2
DeepKlapred: A deep learning framework for identifying protein lysine lactylation sites via multi-view feature fusion
Jiahui Guan, Peilin Xie, Danhong Dong, et al.
International Journal of Biological Macromolecules (2024), pp. 137668-137668
Closed Access | Times Cited: 2
RNADSN: Transfer-Learning 5-Methyluridine (m5U) Modification on mRNAs from Common Features of tRNA
Zhirou Li, Jinge Mao, Daiyun Huang, et al.
International Journal of Molecular Sciences (2022) Vol. 23, Iss. 21, pp. 13493-13493
Open Access | Times Cited: 11
ResNetKhib: a novel cell type-specific tool for predicting lysine 2-hydroxyisobutylation sites via transfer learning
Xiaoti Jia, Pei Zhao, Fuyi Li, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 2
Open Access | Times Cited: 5
Vaxi-DL: An Artificial Intelligence-Enabled Platform for Vaccine Development
P. Preeti, Swarsat Kaushik Nath, Nevidita Arambam, et al.
Methods in molecular biology (2023), pp. 305-316
Closed Access | Times Cited: 5
AntiCPs-CompML: A Comprehensive Fast Track ML method to predict Anti-Corona Peptides
Prem Singh Bist, Sadik Bhattarai, Hilal Tayara, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access | Times Cited: 1
Discovery of novel multi-functional peptides by using protein language models and graph-based deep learning
Jiawei Luo, Kejuan Zhao, Junjie Chen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2023)
Open Access | Times Cited: 4
SLAM: Structure-aware lysine β-hydroxybutyrylation prediction with protein language model
Zhaohui Qin, Huixia Liu, Pei Zhao, et al.
International Journal of Biological Macromolecules (2024) Vol. 280, pp. 135741-135741
Closed Access | Times Cited: 1
Current computational tools for protein lysine acylation site prediction
Zhaohui Qin, Haoran Ren, Pei Zhao, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 6
Closed Access | Times Cited: 1
MST-m6A: A Novel Multi-Scale Transformer-based Framework for Accurate Prediction of m6A Modification Sites Across Diverse Cellular Contexts
Qiaosen Su, Le Thi Phan, Nhat Truong Pham, et al.
Journal of Molecular Biology (2024), pp. 168856-168856
Closed Access | Times Cited: 1
Phased T2T genome assemblies facilitate the mining of disease-resistance genes in Vitis davidii
Yuanyuan Luo, Zhenya Liu, Zhongxin Jin, et al.
Horticulture Research (2024) Vol. 12, Iss. 2
Open Access | Times Cited: 1
ProFeatX: A parallelized protein feature extraction suite for machine learning
David Guevara-Barrientos, Rakesh Kaundal
Computational and Structural Biotechnology Journal (2022) Vol. 21, pp. 796-801
Open Access | Times Cited: 6
Integration of Machine Learning and Structural Analysis for Predicting Peptide Antibiofilm Effects: Advancements in Drug Discovery for Biofilm-Related Infections
Fatemeh Ebrahimi Tarki, Mahboobeh Zarrabi, Ahya Abdi Ali, et al.
Deleted Journal (2023) Vol. 22, Iss. 1
Open Access | Times Cited: 2
DeepBIO is an automated and interpretable deep-learning platform for biological sequence prediction, functional annotation, and visualization analysis
Ruheng Wang, Yi Jiang, Junru Jin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 3
Protein structural bioinformatics: an overview
M. Michael Gromiha, Fathima Ridha, Samuel Selvaraj
Elsevier eBooks (2024)
Closed Access
Esm4ao: A Confident Learning and Protein Language Model Based Predictor for Antioxidative Peptides Screening
Ruihao Zhang, Yonghui Li, Yang Li, et al.
(2024)
Closed Access
AI-m6ARS: Machine learning-driven m6A RNA methylation site discovery with integrated sequence, conservation, and geographical descriptors
Korawich Uthayopas, Alex G. C. de Sá, David B. Ascher
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Closed Access
iProps: A Comprehensive Software Tool for Protein Classification and Analysis With Automatic Machine Learning Capabilities and Model Interpretation Capabilities
Changli Feng, Haiyan Wei, Chugui Xu, et al.
IEEE Journal of Biomedical and Health Informatics (2024) Vol. 28, Iss. 10, pp. 6237-6247
Closed Access
Malivhu: A Comprehensive Bioinformatics Resource for Filtering SARS and MERS Virus Proteins by Their Classification, Family and Species, and Prediction of Their Interactions Against Human Proteins
David Guevara-Barrientos, Rakesh Kaundal
Bioinformatics and Biology Insights (2024) Vol. 18
Open Access
RNA m6A Modifikasyon Bölgelerinin Sınıflandırılması için Öznitelik Çıkarma ve Boyut Azaltma Yöntemlerinin Karşılaştırılması
Batuhan Nuray, Volkan Altuntaş
Journal of Polytechnic (2024), pp. 1-1
Open Access
Metabolic modeling identifies determinants of thermal growth responses inArabidopsis thaliana
Philipp Wendering, Gregory M. Andreou, Roosa A. E. Laitinen, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Engineering dual-functional and thermophilic BMHETase for efficient degradation of polyethylene terephthalate
Ruiju Miao, Guoshun Xu, Yekun Ding, et al.
Bioresource Technology (2024), pp. 131556-131556
Closed Access
InteracTor: A new integrative feature extraction toolkit for improved characterization of protein structural properties
José Cleydson F. Silva, Layla Schuster, Nick Sexson, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access

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