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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

MusiteDeep: a deep-learning based webserver for protein post-translational modification site prediction and visualization
Duolin Wang, Dongpeng Liu, Jiakang Yuchi, et al.
Nucleic Acids Research (2020) Vol. 48, Iss. W1, pp. W140-W146
Open Access | Times Cited: 204

Showing 26-50 of 204 citing articles:

Identification of piRNA disease associations using deep learning
Syed Danish Ali, Hilal Tayara, Kil To Chong
Computational and Structural Biotechnology Journal (2022) Vol. 20, pp. 1208-1217
Open Access | Times Cited: 24
IPs-GRUAtt: An attention-based bidirectional gated recurrent unit network for predicting phosphorylation sites of SARS-CoV-2 infection
Guiyang Zhang, Qiang Tang, Pengmian Feng, et al.
Molecular Therapy — Nucleic Acids (2023) Vol. 32, pp. 28-35
Open Access | Times Cited: 13
Integrating Embeddings from Multiple Protein Language Models to Improve Protein O-GlcNAc Site Prediction
Suresh Pokharel, Pawel Pratyush, Hamid D. Ismail, et al.
International Journal of Molecular Sciences (2023) Vol. 24, Iss. 21, pp. 16000-16000
Open Access | Times Cited: 13
Nonsynonymous mutations in VEGF receptor binding domain alter the efficacy of bevacizumab treatment
Ashif Ahamed, Arijit Samanta, Syed Sahajada Mahafujul Alam, et al.
Journal of Cellular Biochemistry (2024) Vol. 125, Iss. 2
Closed Access | Times Cited: 5
Proteome encoded determinants of protein sorting into extracellular vesicles
Katharina Waury, Dea Gogishvili, Rienk Nieuwland, et al.
Journal of Extracellular Biology (2024) Vol. 3, Iss. 1
Open Access | Times Cited: 5
PTransIPs: Identification of Phosphorylation Sites Enhanced by Protein PLM Embeddings
Ziyang Xu, Haitian Zhong, Bingrui He, et al.
IEEE Journal of Biomedical and Health Informatics (2024) Vol. 28, Iss. 6, pp. 3762-3771
Open Access | Times Cited: 5
A computational and structural approach to identify malignant non-synonymous FOXM1 single nucleotide polymorphisms in triple-negative breast cancer
Prarthana Chatterjee, Satarupa Banerjee
Scientific Reports (2025) Vol. 15, Iss. 1
Open Access
Ubiquitin specific peptidase 11 knockdown slows Huntington’s disease progression via regulating mitochondrial dysfunction and neuronal damage depending on PTEN-mediated AKT pathway
Bai Gao, Yuchen Jing, Xi Li, et al.
Molecular Medicine (2025) Vol. 31, Iss. 1
Open Access
Tat-fimbriae (“tafi”) – an unusual type of haloarchaeal surface structure depending on the Tat translocation pathway
Anna V. Galeva, Dahe Zhao, Alexey S. Syutkin, et al.
iScience (2025) Vol. 28, Iss. 2, pp. 111793-111793
Open Access
Guardian of tissue, accomplice of cancer: the two faces of a proton sensor-G protein-coupled receptor 68
Sautan Show, Amartya Mukherjee, Upendra Nongthomba, et al.
Deleted Journal (2025) Vol. 2, Iss. 1
Open Access
Male secreted short glycoproteins link sperm competition to the reproductive isolation of species
Justin Van Goor, Asan Turdiev, Savannah J. Speir, et al.
Current Biology (2025)
Closed Access
A Novel Missense Variant of BMPR1A in Juvenile Polyposis Syndrome: Assessment of Structural and Functional Alternations
Mengyuan Yang, Z. Tong, Zhijun Yuan, et al.
Human Mutation (2025) Vol. 2025, Iss. 1
Open Access
Comprehensive in silico characterization of nonsynonymous SNPs in the human ezrin (EZR) gene and their role in disease pathogenesis
Sadia Akter, M.D. MARWA TANTAWY NERMEEN A. FUAD, Zimam Mahmud, et al.
Biochemistry and Biophysics Reports (2025) Vol. 42, pp. 101972-101972
Closed Access
Proteoform-predictor: Increasing the Phylogenetic Reach of Top-Down Proteomics
Taojunfeng Su, Ryan T. Fellers, Joseph B. Greer, et al.
Journal of Proteome Research (2025)
Closed Access
Integration of Bioinformatic Tools in Functional Analysis of Genes and Their Application in Disease Diagnosis
Jaspreet Kaur, Simran Jit, Mansi Verma
(2025), pp. 29-71
Closed Access
BnaEFR1 and BnaEFR2 genes play key roles in elf18-triggered immunity in Brassica napus L.
Junmei Cui, Jingbo Qin, Jiaping Wei, et al.
Scientia Horticulturae (2025) Vol. 342, pp. 114054-114054
Open Access
P21‐Activated Kinase 1 (PAK1) Modulates Therapeutic Response to Ionizing Radiation in Head and Neck Squamous Cell Carcinoma Cells
Swetha Rajendran, Rohan Prasad Surabhi, Arun Kumar, et al.
Molecular Carcinogenesis (2025)
Closed Access
Interaction between CaV2.1 and Junctophilin3/4 depends on the II-III loop of CaV2.1 and on the α-helical region of Junctophilin3/4
Stefano Perni, Alexander Polster, Kurt G. Beam
Journal of Biological Chemistry (2025), pp. 108424-108424
Open Access
A Comprehensive Review on the Therapeutic Applications of Snake Venom Nerve Growth Factor
S. Asha Devi, G. Jayaraman
International Journal of Peptide Research and Therapeutics (2025) Vol. 31, Iss. 4
Closed Access
DeepPSP: A Global–Local Information-Based Deep Neural Network for the Prediction of Protein Phosphorylation Sites
Lei Guo, Yongpei Wang, Xiangnan Xu, et al.
Journal of Proteome Research (2020) Vol. 20, Iss. 1, pp. 346-356
Closed Access | Times Cited: 35
Computational cancer neoantigen prediction: current status and recent advances
Georgios Fotakis, Zlatko Trajanoski, Dietmar Rieder
Immuno-Oncology Technology (2021) Vol. 12, pp. 100052-100052
Open Access | Times Cited: 30
GPS-Uber: a hybrid-learning framework for prediction of general and E3-specific lysine ubiquitination sites
Chenwei Wang, Xiaodan Tan, Dachao Tang, et al.
Briefings in Bioinformatics (2021) Vol. 23, Iss. 2
Closed Access | Times Cited: 30
A SWEET surprise: Anaerobic fungal sugar transporters and chimeras enhance sugar uptake in yeast
Igor A. Podolsky, Susanna Seppälä, Haiqing Xu, et al.
Metabolic Engineering (2021) Vol. 66, pp. 137-147
Open Access | Times Cited: 29
In silico analysis of mutations near S1/S2 cleavage site in SARS‐CoV‐2 spike protein reveals increased propensity of glycosylation in Omicron strain
Christopher A. Beaudoin, Arun Prasad Pandurangan, So Yeon Kim, et al.
Journal of Medical Virology (2022) Vol. 94, Iss. 9, pp. 4181-4192
Open Access | Times Cited: 19
Protein phosphorylation database and prediction tools
Mingxiao Zhao, Qiang Chen, Fulai Li, et al.
Briefings in Bioinformatics (2023) Vol. 24, Iss. 2
Closed Access | Times Cited: 12

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