OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!
If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.
Requested Article:
Critical downstream analysis steps for single-cell RNA sequencing data
Zilong Zhang, Feifei Cui, Chen Lin, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 5
Closed Access | Times Cited: 49
Zilong Zhang, Feifei Cui, Chen Lin, et al.
Briefings in Bioinformatics (2021) Vol. 22, Iss. 5
Closed Access | Times Cited: 49
Showing 26-50 of 49 citing articles:
Single-cell RNA-seq data clustering by deep information fusion
Liang-Rui Ren, Jun Wang, Wei Li, et al.
Briefings in Functional Genomics (2023) Vol. 23, Iss. 2, pp. 128-137
Closed Access | Times Cited: 6
Liang-Rui Ren, Jun Wang, Wei Li, et al.
Briefings in Functional Genomics (2023) Vol. 23, Iss. 2, pp. 128-137
Closed Access | Times Cited: 6
Deep Learning Applications in Single-Cell Omics Data Analysis
Nafiseh Erfanian, A. Ali Heydari, Pablo Iáñez Picazo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 14
Nafiseh Erfanian, A. Ali Heydari, Pablo Iáñez Picazo, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2021)
Open Access | Times Cited: 14
MulCNN: An efficient and accurate deep learning method based on gene embedding for cell type identification in single-cell RNA-seq data
Linfang Jiao, Yongqi Ren, Lulu Wang, et al.
Frontiers in Genetics (2023) Vol. 14
Open Access | Times Cited: 5
Linfang Jiao, Yongqi Ren, Lulu Wang, et al.
Frontiers in Genetics (2023) Vol. 14
Open Access | Times Cited: 5
Analysis of damage-associated molecular patterns in amyotrophic lateral sclerosis based on ScRNA-seq and bulk RNA-seq data
Yue Shi, Ruixia Zhu
Frontiers in Neuroscience (2023) Vol. 17
Open Access | Times Cited: 5
Yue Shi, Ruixia Zhu
Frontiers in Neuroscience (2023) Vol. 17
Open Access | Times Cited: 5
Decoding Human Biology and Disease Using Single-Cell Omics Technologies
Qiang Shi, Xueyan Chen, Zemin Zhang
Genomics Proteomics & Bioinformatics (2023) Vol. 21, Iss. 5, pp. 926-949
Open Access | Times Cited: 4
Qiang Shi, Xueyan Chen, Zemin Zhang
Genomics Proteomics & Bioinformatics (2023) Vol. 21, Iss. 5, pp. 926-949
Open Access | Times Cited: 4
CD81+ fibroblasts, a unique subpopulation with accelerated cellular senescence, exaggerate inflammation and activate neutrophils via C3/C3aR1 axis in periodontitis
Liangliang Fu, Chenghu Yin, Zhao Qin, et al.
(2024)
Open Access | Times Cited: 1
Liangliang Fu, Chenghu Yin, Zhao Qin, et al.
(2024)
Open Access | Times Cited: 1
Single-cell RNA Sequencing and its Applications in Pituitary Research
Shuangjian Yang, Congcong Deng, Changqin Pu, et al.
Neuroendocrinology (2024) Vol. 114, Iss. 10, pp. 875-893
Open Access | Times Cited: 1
Shuangjian Yang, Congcong Deng, Changqin Pu, et al.
Neuroendocrinology (2024) Vol. 114, Iss. 10, pp. 875-893
Open Access | Times Cited: 1
Fuzzy-Based Identification of Transition Cells to Infer Cell Trajectory for Single-Cell Transcriptomics
Xiang Chen, Yibing Ma, Yongle Shi, et al.
Journal of Computational Biology (2024)
Closed Access | Times Cited: 1
Xiang Chen, Yibing Ma, Yongle Shi, et al.
Journal of Computational Biology (2024)
Closed Access | Times Cited: 1
Unified K-means coupled self-representation and neighborhood kernel learning for clustering single-cell RNA-sequencing data
Zheng Li, Chang Tang, Xiao Zheng, et al.
Neurocomputing (2022) Vol. 501, pp. 715-726
Closed Access | Times Cited: 7
Zheng Li, Chang Tang, Xiao Zheng, et al.
Neurocomputing (2022) Vol. 501, pp. 715-726
Closed Access | Times Cited: 7
Unveiling novel insights in prostate cancer through single-cell RNA sequencing
Wenyue Yu, Chun Wang, Zhiqun Shang, et al.
Frontiers in Oncology (2023) Vol. 13
Open Access | Times Cited: 3
Wenyue Yu, Chun Wang, Zhiqun Shang, et al.
Frontiers in Oncology (2023) Vol. 13
Open Access | Times Cited: 3
Human-Spa: An Online Platform Based on Spatial Transcriptome Data for Diseases of Human Systems
Yunyun Su, Shiyu Yan, Chen Cao, et al.
2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (2023) Vol. 96, pp. 293-298
Closed Access | Times Cited: 3
Yunyun Su, Shiyu Yan, Chen Cao, et al.
2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (2023) Vol. 96, pp. 293-298
Closed Access | Times Cited: 3
DSAE-Impute: Learning Discriminative Stacked Autoencoders for Imputing Single-cell RNA-seq Data
Shengfeng Gan, Huan Deng, Yang Qiu, et al.
Current Bioinformatics (2022) Vol. 17, Iss. 5, pp. 440-451
Closed Access | Times Cited: 5
Shengfeng Gan, Huan Deng, Yang Qiu, et al.
Current Bioinformatics (2022) Vol. 17, Iss. 5, pp. 440-451
Closed Access | Times Cited: 5
PKI: A bioinformatics method of quantifying the importance of nodes in gene regulatory network via a pseudo knockout index
Yijuan Wang, Chao Liu, Qiao Xu, et al.
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms (2023) Vol. 1866, Iss. 2, pp. 194911-194911
Closed Access | Times Cited: 2
Yijuan Wang, Chao Liu, Qiao Xu, et al.
Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms (2023) Vol. 1866, Iss. 2, pp. 194911-194911
Closed Access | Times Cited: 2
PertOrg 1.0: a comprehensive resource of multilevel alterations induced in model organisms by in vivo genetic perturbation
Zhaoyu Zhai, Xuelu Zhang, Lu Zhou, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D1094-D1101
Open Access | Times Cited: 4
Zhaoyu Zhai, Xuelu Zhang, Lu Zhou, et al.
Nucleic Acids Research (2022) Vol. 51, Iss. D1, pp. D1094-D1101
Open Access | Times Cited: 4
Comparison of Dimensionality Reduction and Clustering Methods for Single-Cell Transcriptomics Data
Vrushali Pandit, Asish Kumar Swain, Pankaj Yadav
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 3
Vrushali Pandit, Asish Kumar Swain, Pankaj Yadav
bioRxiv (Cold Spring Harbor Laboratory) (2022)
Open Access | Times Cited: 3
Single-cell RNA sequencing data analysis utilizing multi-type graph neural networks
Li Xu, Z M Li, Jiaxu Ren, et al.
Computers in Biology and Medicine (2024) Vol. 179, pp. 108921-108921
Closed Access
Li Xu, Z M Li, Jiaxu Ren, et al.
Computers in Biology and Medicine (2024) Vol. 179, pp. 108921-108921
Closed Access
scSwinFormer: A Transformer-Based Cell-Type Annotation Method for scRNA-Seq Data Using Smooth Gene Embedding and Global Features
Hengyu Qin, Xiumin Shi, Han Zhou
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 16, pp. 6316-6323
Closed Access
Hengyu Qin, Xiumin Shi, Han Zhou
Journal of Chemical Information and Modeling (2024) Vol. 64, Iss. 16, pp. 6316-6323
Closed Access
Single-cell transcriptome analysis reveals immune microenvironment changes and insights into the transition from DCIS to IDC with associated prognostic genes
Yidi Sun, Zhuoyu Pan, Ziyi Wang, et al.
Journal of Translational Medicine (2024) Vol. 22, Iss. 1
Open Access
Yidi Sun, Zhuoyu Pan, Ziyi Wang, et al.
Journal of Translational Medicine (2024) Vol. 22, Iss. 1
Open Access
GTO: a comprehensive gene therapy omnibus
Xuehang Meng, Yujia Du, Chang Liu, et al.
Nucleic Acids Research (2024) Vol. 53, Iss. D1, pp. D1393-D1403
Open Access
Xuehang Meng, Yujia Du, Chang Liu, et al.
Nucleic Acids Research (2024) Vol. 53, Iss. D1, pp. D1393-D1403
Open Access
CD81+fibroblasts, a unique subpopulation with accelerated cellular senescence, exaggerate inflammation and activate neutrophils via C3/C3aR1 axis in periodontitis
Liangliang Fu, Chenghu Yin, Zhao Qin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
Liangliang Fu, Chenghu Yin, Zhao Qin, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2024)
Open Access
CD81+ fibroblasts, a unique subpopulation with accelerated cellular senescence, exaggerate inflammation and activate neutrophils via C3/C3aR1 axis in periodontitis
Liangliang Fu, Chenghu Yin, Zhao Qin, et al.
(2024)
Open Access
Liangliang Fu, Chenghu Yin, Zhao Qin, et al.
(2024)
Open Access
Multi-omics in exploring the pathophysiology of diabetic retinopathy
Xinlu Li, Xifeng Dong, Wen Zhang, et al.
Frontiers in Cell and Developmental Biology (2024) Vol. 12
Open Access
Xinlu Li, Xifeng Dong, Wen Zhang, et al.
Frontiers in Cell and Developmental Biology (2024) Vol. 12
Open Access
A Stacking Machine Learning Method for IL-10-Induced Peptide Sequence Recognition Based on Unified Deep Representation Learning
Jiayu Li, Jici Jiang, Hongdi Pei, et al.
Applied Sciences (2023) Vol. 13, Iss. 16, pp. 9346-9346
Open Access
Jiayu Li, Jici Jiang, Hongdi Pei, et al.
Applied Sciences (2023) Vol. 13, Iss. 16, pp. 9346-9346
Open Access
RNA Sequencing Technologies at the Single Cell Level in Plants
Alexandra V. Dolgikh, Elena A. Dolgikh
Russian Journal of Plant Physiology (2023) Vol. 70, Iss. 9
Closed Access
Alexandra V. Dolgikh, Elena A. Dolgikh
Russian Journal of Plant Physiology (2023) Vol. 70, Iss. 9
Closed Access
