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OpenAlex Citation Counts

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OpenAlex is a bibliographic catalogue of scientific papers, authors and institutions accessible in open access mode, named after the Library of Alexandria. It's citation coverage is excellent and I hope you will find utility in this listing of citing articles!

If you click the article title, you'll navigate to the article, as listed in CrossRef. If you click the Open Access links, you'll navigate to the "best Open Access location". Clicking the citation count will open this listing for that article. Lastly at the bottom of the page, you'll find basic pagination options.

Requested Article:

From whole-mount to single-cell spatial assessment of gene expression in 3D
Lisa N. Waylen, Hieu T. Nim, Luciano G. Martelotto, et al.
Communications Biology (2020) Vol. 3, Iss. 1
Open Access | Times Cited: 113

Showing 26-50 of 113 citing articles:

Exploiting Single-Cell Tools in Gene and Cell Therapy
Daniel Bode, Alyssa Cull, Juan Rubio‐Lara, et al.
Frontiers in Immunology (2021) Vol. 12
Open Access | Times Cited: 33
Spatially resolved transcriptomics and the kidney: many opportunities
Eryn E. Dixon, Hao Wu, Elizabeth Sulvarán-Guel, et al.
Kidney International (2022) Vol. 102, Iss. 3, pp. 482-491
Closed Access | Times Cited: 25
Disparities in spatially variable gene calling highlight the need for benchmarking spatial transcriptomics methods
Natalie Charitakis, Agus Salim, Adam T. Piers, et al.
Genome biology (2023) Vol. 24, Iss. 1
Open Access | Times Cited: 14
Multimodal contrastive learning for spatial gene expression prediction using histology images
Wenwen Min, Zhiceng Shi, Jun Zhang, et al.
Briefings in Bioinformatics (2024) Vol. 25, Iss. 6
Open Access | Times Cited: 5
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics
Inbal Avraham‐Davidi, Simon Mages, Johanna Klughammer, et al.
(2025)
Open Access
Spatially defined multicellular functional units in colorectal cancer revealed from single cell and spatial transcriptomics
Inbal Avraham‐Davidi, Simon Mages, Johanna Klughammer, et al.
(2025)
Open Access
Mapping molecular landscapes in triple-negative breast cancer: insights from spatial transcriptomics
Fares Saeed H. Al-Mansour, Hassan H. Almasoudi, Ali Albarrati
Naunyn-Schmiedeberg s Archives of Pharmacology (2025)
Closed Access
Next-Generation Digital Histopathology of the Tumor Microenvironment
Felicitas Mungenast, Achala Fernando, Robert Nica, et al.
Genes (2021) Vol. 12, Iss. 4, pp. 538-538
Open Access | Times Cited: 31
Cell state transitions: definitions and challenges
Carla Mulas, Agathe Chaigne, Austin Smith, et al.
Development (2021) Vol. 148, Iss. 20
Open Access | Times Cited: 30
A review of bioeffects induced by focused ultrasound combined with microbubbles on the neurovascular unit
Si Chen, Arash Nazeri, Hongchae Baek, et al.
Journal of Cerebral Blood Flow & Metabolism (2021) Vol. 42, Iss. 1, pp. 3-26
Open Access | Times Cited: 30
Spatiotemporal molecular medicine: A new era of clinical and translational medicine
Xiangdong Wang, Jia Fan
Clinical and Translational Medicine (2021) Vol. 11, Iss. 1
Open Access | Times Cited: 27
Single-cell RNA and protein profiling of immune cells from the mouse brain and its border tissues
Isabelle Scheyltjens, Hannah Van Hove, Karen De Vlaminck, et al.
Nature Protocols (2022) Vol. 17, Iss. 10, pp. 2354-2388
Closed Access | Times Cited: 20
A Review of the Application of Spatial Transcriptomics in Neuroscience
Le Zhang, Zhenqi Xiong, Ming Xiao
Interdisciplinary Sciences Computational Life Sciences (2024) Vol. 16, Iss. 2, pp. 243-260
Closed Access | Times Cited: 4
Edge-relational window-attentional graph neural network for gene expression prediction in spatial transcriptomics analysis
Cui Chen, Zuping Zhang, Panrui Tang, et al.
Computers in Biology and Medicine (2024) Vol. 174, pp. 108449-108449
Closed Access | Times Cited: 4
Multi-view Adaptive Fusion Network for Spatially Resolved Transcriptomics Data Clustering
Yanran Zhu, Xiao He, Chang Tang, et al.
IEEE Transactions on Knowledge and Data Engineering (2024) Vol. 36, Iss. 12, pp. 8889-8900
Closed Access | Times Cited: 4
Versatile system cores as a conceptual basis for generality in cell and developmental biology
Elisa Cristina De Proença Rodrigues Gallo, Stefano De Renzis, James Sharpe, et al.
Cell Systems (2024) Vol. 15, Iss. 9, pp. 790-807
Open Access | Times Cited: 4
Inferring Multi-slice Spatially Resolved Gene Expression from H&E-stained Histology Images with STMCL
Zhiceng Shi, Fangfang Zhu, Wenwen Min
Methods (2025)
Closed Access
Spatial Transcriptomics in Human Cardiac Tissue
Quynh Nguyen, Lin Tung, Bruce Lin, et al.
International Journal of Molecular Sciences (2025) Vol. 26, Iss. 3, pp. 995-995
Open Access
Application of Spatial Omics in the Cardiovascular System
Yuhong Hu, Hao Jia, Hao Cui, et al.
Research (2025) Vol. 8
Open Access
Recent advances in nanomaterials for integrated phototherapy and immunotherapy
Zhuqing Sun, Nannan Wang, Yelin Wu, et al.
Coordination Chemistry Reviews (2025) Vol. 535, pp. 216608-216608
Open Access
Spatial transcriptomic imaging of an intact organism using volumetric DNA microscopy
Nianchao Qian, Joshua A. Weinstein
Nature Biotechnology (2025)
Open Access
mcDETECT: Decoding 3D Spatial Synaptic Transcriptomes with Subcellular-Resolution Spatial Transcriptomics
Chenyang Yuan, Krupa B. Patel, Hongshun Shi, et al.
bioRxiv (Cold Spring Harbor Laboratory) (2025)
Closed Access
VT3D: a visualization toolbox for 3D transcriptomic data
Lidong Guo, Yao Li, Yanwei Qi, et al.
Journal of genetics and genomics/Journal of Genetics and Genomics (2023) Vol. 50, Iss. 9, pp. 713-719
Open Access | Times Cited: 9
Single-Cell Mapping of GLP-1 and GIP Receptor Expression in the Dorsal Vagal Complex
Mette Q. Ludwig, Petar V. Todorov, Kristoffer L. Egerod, et al.
Diabetes (2021) Vol. 70, Iss. 9, pp. 1945-1955
Open Access | Times Cited: 22
Biosensors Designed for Clinical Applications
James F. Rusling, Robert J. Forster
Biomedicines (2021) Vol. 9, Iss. 7, pp. 702-702
Open Access | Times Cited: 21

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